Strain Fitness in Marinobacter adhaerens HP15 around HP15_3406

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,579,559	-		HP15_3407	0.38	-0.4
3,579,598	-		HP15_3407	0.41	+0.9
3,579,598	-		HP15_3407	0.41	-0.6
3,579,611	-		HP15_3407	0.42	-0.8
3,579,760	+		HP15_3407	0.53	-0.1
3,579,972	-		HP15_3407	0.68	-0.9
3,580,115	-		HP15_3407	0.78	-0.1
3,580,199	-		HP15_3407	0.84	-0.1
3,580,286	+				+1.0
3,580,286	+				+0.5
3,580,317	+				-0.7
3,580,331	+				-0.1
3,580,331	+				-0.7
3,580,331	+				-0.6
3,580,339	-				-1.3
3,580,339	-				+0.3
3,580,435	+		HP15_3406	0.21	-1.0
3,580,443	-		HP15_3406	0.28	+0.2
3,580,528	+				-2.1
3,580,558	-				-1.2
3,580,626	+				-0.5
3,580,628	+				+0.4
3,580,629	-				-0.0
3,580,738	-		HP15_3408	0.10	-0.7
3,580,965	+		HP15_3408	0.27	+0.1
3,581,054	-		HP15_3408	0.33	-0.4
3,581,056	+		HP15_3408	0.33	-0.9
3,581,063	+		HP15_3408	0.34	+0.8
3,581,202	+		HP15_3408	0.44	-0.2
3,581,238	+		HP15_3408	0.46	+0.2
3,581,323	+		HP15_3408	0.53	-0.5
3,581,404	+		HP15_3408	0.58	-1.2
3,581,435	+		HP15_3408	0.61	-0.7
3,581,438	-		HP15_3408	0.61	+0.3