Strain Fitness in Marinobacter adhaerens HP15 around HP15_3252

Experiment: monoculture; Experiment A, time point 1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	monoculture; Experiment A, time point 1
3,405,498	-		HP15_3251	0.26	+0.3
3,405,565	+		HP15_3251	0.32	-1.1
3,405,615	-		HP15_3251	0.36	-1.5
3,405,627	-		HP15_3251	0.37	-0.9
3,405,652	-		HP15_3251	0.40	-0.4
3,405,751	+		HP15_3251	0.48	-0.2
3,405,800	+		HP15_3251	0.53	+0.2
3,405,802	-		HP15_3251	0.53	+0.6
3,405,848	+		HP15_3251	0.57	+0.4
3,405,877	-		HP15_3251	0.60	+0.3
3,405,924	+		HP15_3251	0.64	-1.9
3,405,924	+		HP15_3251	0.64	-0.0
3,405,937	-		HP15_3251	0.65	-0.0
3,405,959	-		HP15_3251	0.67	-0.1
3,405,973	-		HP15_3251	0.68	+0.0
3,406,032	-		HP15_3251	0.73	+0.5
3,406,128	-		HP15_3251	0.82	+0.9
3,406,218	+		HP15_3251	0.90	-0.4
3,406,227	+				-1.6
3,406,291	-				+0.8
3,406,428	+				-1.4
3,406,431	-				+0.7
3,406,436	-				-0.1
3,406,436	-				-0.3
3,406,469	+				-0.2
3,406,634	-		HP15_3252	0.14	+0.7
3,406,787	+		HP15_3252	0.23	+0.1
3,406,795	-		HP15_3252	0.23	+1.1
3,406,795	-		HP15_3252	0.23	-0.3
3,406,835	+		HP15_3252	0.26	-2.0
3,406,868	+		HP15_3252	0.27	-0.1
3,406,868	+		HP15_3252	0.27	-0.3
3,406,876	-		HP15_3252	0.28	+0.3
3,406,876	-		HP15_3252	0.28	-0.1
3,406,876	-		HP15_3252	0.28	+0.4
3,406,878	+		HP15_3252	0.28	+0.3
3,406,944	-		HP15_3252	0.32	-0.6
3,406,971	+		HP15_3252	0.33	-0.1
3,407,085	+		HP15_3252	0.40	-1.4
3,407,211	+		HP15_3252	0.47	+1.8
3,407,211	+		HP15_3252	0.47	-0.1
3,407,375	+		HP15_3252	0.57	-0.3
3,407,383	-		HP15_3252	0.57	-0.3
3,407,383	-		HP15_3252	0.57	-0.8
3,407,438	-		HP15_3252	0.60	-0.4
3,407,439	-		HP15_3252	0.61	-2.3
3,407,441	+		HP15_3252	0.61	-0.8
3,407,484	-		HP15_3252	0.63	+0.2
3,407,487	+		HP15_3252	0.63	-0.3
3,407,523	+		HP15_3252	0.65	-0.1
3,407,553	-		HP15_3252	0.67	-1.6
3,407,553	-		HP15_3252	0.67	-0.3
3,407,632	-		HP15_3252	0.72	-0.8
3,407,808	+		HP15_3252	0.82	+0.4
3,407,999	+				+0.1
3,408,066	+				-0.3
3,408,099	-				+0.8
3,408,103	+				+0.8
3,408,301	+				-0.9
3,408,337	-		HP15_3253	0.13	+0.6
3,408,348	-		HP15_3253	0.15	+0.4
3,408,371	+		HP15_3253	0.20	+0.5
3,409,006	+				+0.1
3,409,101	+		HP15_3254	0.59	+0.5
3,409,101	+		HP15_3254	0.59	+0.7
3,409,109	-		HP15_3254	0.63	-0.7