Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23540 and AZOBR_RS23545 are separated by 14 nucleotides AZOBR_RS23545 and AZOBR_RS23550 overlap by 1 nucleotides AZOBR_RS23550 and AZOBR_RS23555 are separated by 168 nucleotides
AZOBR_RS23540: AZOBR_RS23540 - tetrathionate reductase subunit A, at 309,929 to 313,036
_RS23540
AZOBR_RS23545: AZOBR_RS23545 - tetrathionate reductase, at 313,051 to 314,184
_RS23545
AZOBR_RS23550: AZOBR_RS23550 - tetrathionate reductase subunit B, at 314,184 to 314,936
_RS23550
AZOBR_RS23555: AZOBR_RS23555 - beta-lactamase, at 315,105 to 315,995
_RS23555
Position (kb) 313
314
315 Strain fitness (log2 ratio) -1
0
1
2 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.075 kb on + strand, within AZOBR_RS23540 at 312.267 kb on + strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.268 kb on - strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.723 kb on + strand, within AZOBR_RS23540 at 312.724 kb on - strand, within AZOBR_RS23540 at 312.938 kb on + strand at 312.939 kb on - strand at 312.939 kb on - strand at 312.939 kb on - strand at 313.220 kb on + strand, within AZOBR_RS23545 at 313.226 kb on + strand, within AZOBR_RS23545 at 313.633 kb on + strand, within AZOBR_RS23545 at 313.634 kb on - strand, within AZOBR_RS23545 at 313.853 kb on + strand, within AZOBR_RS23545 at 313.874 kb on + strand, within AZOBR_RS23545 at 313.875 kb on - strand, within AZOBR_RS23545 at 313.931 kb on + strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 313.932 kb on - strand, within AZOBR_RS23545 at 314.060 kb on + strand, within AZOBR_RS23545 at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.114 kb on + strand at 314.115 kb on - strand at 314.507 kb on - strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.527 kb on + strand, within AZOBR_RS23550 at 314.528 kb on - strand, within AZOBR_RS23550 at 314.656 kb on + strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.657 kb on - strand, within AZOBR_RS23550 at 314.689 kb on + strand, within AZOBR_RS23550 at 314.986 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand at 315.047 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 312,075 + AZOBR_RS23540 0.69 +0.1 312,075 + AZOBR_RS23540 0.69 -0.0 312,075 + AZOBR_RS23540 0.69 -0.9 312,267 + AZOBR_RS23540 0.75 +0.0 312,268 - AZOBR_RS23540 0.75 +0.6 312,268 - AZOBR_RS23540 0.75 -0.5 312,723 + AZOBR_RS23540 0.90 -1.0 312,723 + AZOBR_RS23540 0.90 -0.3 312,724 - AZOBR_RS23540 0.90 +1.0 312,938 + +0.1 312,939 - -1.1 312,939 - -0.7 312,939 - +0.1 313,220 + AZOBR_RS23545 0.15 +0.4 313,226 + AZOBR_RS23545 0.15 +2.1 313,633 + AZOBR_RS23545 0.51 -0.5 313,634 - AZOBR_RS23545 0.51 +1.1 313,853 + AZOBR_RS23545 0.71 -0.6 313,874 + AZOBR_RS23545 0.73 +0.0 313,875 - AZOBR_RS23545 0.73 -0.2 313,931 + AZOBR_RS23545 0.78 -0.6 313,932 - AZOBR_RS23545 0.78 -1.1 313,932 - AZOBR_RS23545 0.78 +0.2 313,932 - AZOBR_RS23545 0.78 -0.7 313,932 - AZOBR_RS23545 0.78 +0.2 313,932 - AZOBR_RS23545 0.78 -0.3 313,932 - AZOBR_RS23545 0.78 +1.5 314,060 + AZOBR_RS23545 0.89 -0.2 314,114 + +0.4 314,114 + +1.0 314,114 + -0.0 314,114 + +0.2 314,115 - +0.0 314,507 - AZOBR_RS23550 0.43 -0.1 314,527 + AZOBR_RS23550 0.46 +1.1 314,527 + AZOBR_RS23550 0.46 -0.2 314,527 + AZOBR_RS23550 0.46 +0.2 314,528 - AZOBR_RS23550 0.46 +0.2 314,656 + AZOBR_RS23550 0.63 -0.0 314,657 - AZOBR_RS23550 0.63 +0.6 314,657 - AZOBR_RS23550 0.63 +1.7 314,689 + AZOBR_RS23550 0.67 -0.4 314,986 + -1.0 315,047 + -0.1 315,047 + +0.6 315,047 + +0.8
Or see this region's nucleotide sequence