Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16380 and AZOBR_RS16385 are separated by 226 nucleotides AZOBR_RS16385 and AZOBR_RS16390 are separated by 68 nucleotides AZOBR_RS16390 and AZOBR_RS16395 are separated by 201 nucleotides
AZOBR_RS16380: AZOBR_RS16380 - permease, at 423,064 to 424,158
_RS16380
AZOBR_RS16385: AZOBR_RS16385 - aminopeptidase A, at 424,385 to 425,887
_RS16385
AZOBR_RS16390: AZOBR_RS16390 - DNA polymerase III subunit chi, at 425,956 to 426,405
_RS16390
AZOBR_RS16395: AZOBR_RS16395 - histidine kinase, at 426,607 to 427,809
_RS16395
Position (kb) 424
425
426 Strain fitness (log2 ratio) -1
0
1 at 424.234 kb on - strand at 424.234 kb on - strand at 424.234 kb on - strand at 424.234 kb on - strand at 424.238 kb on - strand at 424.299 kb on + strand at 425.459 kb on + strand, within AZOBR_RS16385 at 425.870 kb on + strand at 425.885 kb on + strand at 425.885 kb on + strand at 425.885 kb on + strand at 425.885 kb on + strand at 426.448 kb on - strand at 426.466 kb on + strand at 426.466 kb on + strand at 426.466 kb on + strand at 426.466 kb on + strand at 426.467 kb on - strand at 426.467 kb on - strand at 426.467 kb on - strand at 426.727 kb on + strand at 426.866 kb on - strand, within AZOBR_RS16395 at 426.866 kb on - strand, within AZOBR_RS16395 at 426.866 kb on - strand, within AZOBR_RS16395 at 426.866 kb on - strand, within AZOBR_RS16395 at 426.877 kb on + strand, within AZOBR_RS16395 at 426.877 kb on + strand, within AZOBR_RS16395 at 426.878 kb on - strand, within AZOBR_RS16395 at 426.878 kb on - strand, within AZOBR_RS16395 at 426.878 kb on - strand, within AZOBR_RS16395
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 424,234 - -0.4 424,234 - +0.1 424,234 - +0.2 424,234 - -0.6 424,238 - +0.1 424,299 + -0.3 425,459 + AZOBR_RS16385 0.71 -1.2 425,870 + -0.3 425,885 + -1.2 425,885 + -0.1 425,885 + +0.2 425,885 + -0.3 426,448 - -0.1 426,466 + -0.4 426,466 + +1.6 426,466 + +0.1 426,466 + -0.2 426,467 - -0.4 426,467 - +0.5 426,467 - -0.6 426,727 + -0.2 426,866 - AZOBR_RS16395 0.22 +0.3 426,866 - AZOBR_RS16395 0.22 -1.0 426,866 - AZOBR_RS16395 0.22 -1.3 426,866 - AZOBR_RS16395 0.22 -0.8 426,877 + AZOBR_RS16395 0.22 +0.9 426,877 + AZOBR_RS16395 0.22 +0.0 426,878 - AZOBR_RS16395 0.23 -0.6 426,878 - AZOBR_RS16395 0.23 -0.5 426,878 - AZOBR_RS16395 0.23 +0.8
Or see this region's nucleotide sequence