Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS09650 and AZOBR_RS09655 are separated by 19 nucleotides AZOBR_RS09655 and AZOBR_RS09660 are separated by 50 nucleotides AZOBR_RS09660 and AZOBR_RS09665 are separated by 87 nucleotides AZOBR_RS09665 and AZOBR_RS09670 are separated by 424 nucleotides
AZOBR_RS09650: AZOBR_RS09650 - lysine transporter LysE, at 2,024,157 to 2,024,780
_RS09650
AZOBR_RS09655: AZOBR_RS09655 - AsnC family transcriptional regulator, at 2,024,800 to 2,025,255
_RS09655
AZOBR_RS09660: AZOBR_RS09660 - Rubredoxin-2 (modular protein), at 2,025,306 to 2,025,599
_RS09660
AZOBR_RS09665: AZOBR_RS09665 - hypothetical protein, at 2,025,687 to 2,027,006
_RS09665
AZOBR_RS09670: AZOBR_RS09670 - hypothetical protein, at 2,027,431 to 2,027,961
_RS09670
Position (kb)
2025
2026
2027
2028 Strain fitness (log2 ratio)
-1
0
1
2 at 2024.704 kb on - strand, within AZOBR_RS09650 at 2024.951 kb on + strand, within AZOBR_RS09655 at 2024.951 kb on + strand, within AZOBR_RS09655 at 2024.951 kb on + strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2024.952 kb on - strand, within AZOBR_RS09655 at 2025.433 kb on + strand, within AZOBR_RS09660 at 2025.434 kb on - strand, within AZOBR_RS09660 at 2025.434 kb on - strand, within AZOBR_RS09660 at 2025.632 kb on + strand at 2025.632 kb on + strand at 2025.633 kb on - strand at 2025.633 kb on - strand at 2026.966 kb on + strand at 2026.967 kb on - strand at 2026.967 kb on - strand at 2027.055 kb on - strand at 2027.102 kb on + strand at 2027.103 kb on - strand at 2027.245 kb on + strand at 2027.245 kb on + strand at 2027.246 kb on - strand at 2027.246 kb on - strand at 2027.273 kb on - strand at 2027.566 kb on + strand, within AZOBR_RS09670 at 2027.567 kb on - strand, within AZOBR_RS09670 at 2027.900 kb on - strand, within AZOBR_RS09670
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 2,024,704 - AZOBR_RS09650 0.88 -0.3 2,024,951 + AZOBR_RS09655 0.33 +0.5 2,024,951 + AZOBR_RS09655 0.33 +2.1 2,024,951 + AZOBR_RS09655 0.33 -1.5 2,024,952 - AZOBR_RS09655 0.33 +0.1 2,024,952 - AZOBR_RS09655 0.33 -0.1 2,024,952 - AZOBR_RS09655 0.33 -0.2 2,024,952 - AZOBR_RS09655 0.33 +0.2 2,025,433 + AZOBR_RS09660 0.43 -0.1 2,025,434 - AZOBR_RS09660 0.44 +1.9 2,025,434 - AZOBR_RS09660 0.44 -0.4 2,025,632 + +0.8 2,025,632 + +0.2 2,025,633 - -0.7 2,025,633 - +2.1 2,026,966 + -0.8 2,026,967 - +0.2 2,026,967 - -0.3 2,027,055 - +0.0 2,027,102 + -1.2 2,027,103 - +0.4 2,027,245 + +1.1 2,027,245 + -0.2 2,027,246 - +1.1 2,027,246 - +0.3 2,027,273 - -0.5 2,027,566 + AZOBR_RS09670 0.25 -0.3 2,027,567 - AZOBR_RS09670 0.26 +2.1 2,027,900 - AZOBR_RS09670 0.88 +0.5
Or see this region's nucleotide sequence