Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08335 and AZOBR_RS08340 are separated by 103 nucleotides AZOBR_RS08340 and AZOBR_RS08345 are separated by 22 nucleotides AZOBR_RS08345 and AZOBR_RS08350 overlap by 1 nucleotides
AZOBR_RS08335: AZOBR_RS08335 - hypothetical protein, at 1,753,037 to 1,753,255
_RS08335
AZOBR_RS08340: AZOBR_RS08340 - ABC transporter, at 1,753,359 to 1,754,150
_RS08340
AZOBR_RS08345: AZOBR_RS08345 - ABC transporter permease, at 1,754,173 to 1,754,949
_RS08345
AZOBR_RS08350: AZOBR_RS08350 - alanine racemase, at 1,754,949 to 1,756,085
_RS08350
Position (kb) 1754
1755 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 1753.351 kb on - strand at 1753.360 kb on + strand at 1753.361 kb on - strand at 1753.423 kb on + strand at 1753.424 kb on - strand at 1753.424 kb on - strand at 1753.424 kb on - strand at 1753.483 kb on + strand, within AZOBR_RS08340 at 1753.484 kb on - strand, within AZOBR_RS08340 at 1753.484 kb on - strand, within AZOBR_RS08340 at 1754.207 kb on + strand at 1754.208 kb on - strand at 1754.295 kb on - strand, within AZOBR_RS08345 at 1754.402 kb on + strand, within AZOBR_RS08345 at 1754.403 kb on - strand, within AZOBR_RS08345 at 1754.403 kb on - strand, within AZOBR_RS08345 at 1754.403 kb on - strand, within AZOBR_RS08345 at 1754.531 kb on + strand, within AZOBR_RS08345 at 1754.732 kb on + strand, within AZOBR_RS08345 at 1754.733 kb on - strand, within AZOBR_RS08345 at 1754.798 kb on + strand, within AZOBR_RS08345 at 1755.305 kb on + strand at 1755.306 kb on - strand, within AZOBR_RS08350
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 1,753,351 - -0.2 1,753,360 + +2.1 1,753,361 - +0.2 1,753,423 + -0.9 1,753,424 - +0.2 1,753,424 - -1.3 1,753,424 - -1.6 1,753,483 + AZOBR_RS08340 0.16 -0.5 1,753,484 - AZOBR_RS08340 0.16 -2.4 1,753,484 - AZOBR_RS08340 0.16 -1.0 1,754,207 + -0.2 1,754,208 - -0.9 1,754,295 - AZOBR_RS08345 0.16 +0.5 1,754,402 + AZOBR_RS08345 0.29 +2.1 1,754,403 - AZOBR_RS08345 0.30 -2.3 1,754,403 - AZOBR_RS08345 0.30 -2.6 1,754,403 - AZOBR_RS08345 0.30 -3.1 1,754,531 + AZOBR_RS08345 0.46 +2.1 1,754,732 + AZOBR_RS08345 0.72 +0.1 1,754,733 - AZOBR_RS08345 0.72 -2.6 1,754,798 + AZOBR_RS08345 0.80 +0.5 1,755,305 + +2.1 1,755,306 - AZOBR_RS08350 0.31 +0.3
Or see this region's nucleotide sequence