Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08170 and AZOBR_RS08175 are separated by 354 nucleotides AZOBR_RS08175 and AZOBR_RS08180 are separated by 97 nucleotides
AZOBR_RS08170: AZOBR_RS08170 - carbon-nitrogen family hydrolase, at 1,721,688 to 1,722,584
_RS08170
AZOBR_RS08175: AZOBR_RS08175 - transcriptional regulator, at 1,722,939 to 1,723,451
_RS08175
AZOBR_RS08180: AZOBR_RS08180 - hypothetical protein, at 1,723,549 to 1,724,859
_RS08180
Position (kb)
1722
1723
1724 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1722.047 kb on - strand, within AZOBR_RS08170 at 1722.137 kb on - strand, within AZOBR_RS08170 at 1722.149 kb on - strand, within AZOBR_RS08170 at 1722.149 kb on - strand, within AZOBR_RS08170 at 1722.184 kb on + strand, within AZOBR_RS08170 at 1722.185 kb on - strand, within AZOBR_RS08170 at 1722.229 kb on + strand, within AZOBR_RS08170 at 1722.277 kb on + strand, within AZOBR_RS08170 at 1722.277 kb on + strand, within AZOBR_RS08170 at 1722.277 kb on + strand, within AZOBR_RS08170 at 1722.278 kb on - strand, within AZOBR_RS08170 at 1722.278 kb on - strand, within AZOBR_RS08170 at 1722.280 kb on + strand, within AZOBR_RS08170 at 1722.280 kb on + strand, within AZOBR_RS08170 at 1722.425 kb on - strand, within AZOBR_RS08170 at 1722.425 kb on - strand, within AZOBR_RS08170 at 1722.425 kb on - strand, within AZOBR_RS08170 at 1722.584 kb on + strand at 1722.766 kb on + strand at 1722.767 kb on - strand at 1722.783 kb on - strand at 1722.896 kb on - strand at 1723.147 kb on - strand, within AZOBR_RS08175 at 1723.311 kb on + strand, within AZOBR_RS08175 at 1723.311 kb on + strand, within AZOBR_RS08175 at 1723.789 kb on + strand, within AZOBR_RS08180 at 1723.789 kb on + strand, within AZOBR_RS08180 at 1723.789 kb on + strand, within AZOBR_RS08180 at 1723.790 kb on - strand, within AZOBR_RS08180 at 1723.790 kb on - strand, within AZOBR_RS08180 at 1723.790 kb on - strand, within AZOBR_RS08180 at 1723.790 kb on - strand, within AZOBR_RS08180 at 1723.790 kb on - strand, within AZOBR_RS08180 at 1724.075 kb on + strand, within AZOBR_RS08180 at 1724.075 kb on + strand, within AZOBR_RS08180 at 1724.075 kb on + strand, within AZOBR_RS08180 at 1724.075 kb on + strand, within AZOBR_RS08180 at 1724.076 kb on - strand, within AZOBR_RS08180
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 1,722,047 - AZOBR_RS08170 0.40 -0.0 1,722,137 - AZOBR_RS08170 0.50 -0.1 1,722,149 - AZOBR_RS08170 0.51 -1.6 1,722,149 - AZOBR_RS08170 0.51 +1.7 1,722,184 + AZOBR_RS08170 0.55 +0.1 1,722,185 - AZOBR_RS08170 0.55 +0.4 1,722,229 + AZOBR_RS08170 0.60 -1.4 1,722,277 + AZOBR_RS08170 0.66 -0.0 1,722,277 + AZOBR_RS08170 0.66 -0.2 1,722,277 + AZOBR_RS08170 0.66 +0.5 1,722,278 - AZOBR_RS08170 0.66 -1.1 1,722,278 - AZOBR_RS08170 0.66 +1.5 1,722,280 + AZOBR_RS08170 0.66 +1.1 1,722,280 + AZOBR_RS08170 0.66 +0.1 1,722,425 - AZOBR_RS08170 0.82 +1.1 1,722,425 - AZOBR_RS08170 0.82 +1.3 1,722,425 - AZOBR_RS08170 0.82 +2.1 1,722,584 + +0.3 1,722,766 + +1.9 1,722,767 - -0.1 1,722,783 - +0.0 1,722,896 - +0.2 1,723,147 - AZOBR_RS08175 0.41 -1.2 1,723,311 + AZOBR_RS08175 0.73 -1.8 1,723,311 + AZOBR_RS08175 0.73 -0.3 1,723,789 + AZOBR_RS08180 0.18 -1.3 1,723,789 + AZOBR_RS08180 0.18 -1.6 1,723,789 + AZOBR_RS08180 0.18 +1.1 1,723,790 - AZOBR_RS08180 0.18 -0.6 1,723,790 - AZOBR_RS08180 0.18 +0.1 1,723,790 - AZOBR_RS08180 0.18 -0.6 1,723,790 - AZOBR_RS08180 0.18 -0.2 1,723,790 - AZOBR_RS08180 0.18 +0.4 1,724,075 + AZOBR_RS08180 0.40 +0.8 1,724,075 + AZOBR_RS08180 0.40 +0.3 1,724,075 + AZOBR_RS08180 0.40 +1.1 1,724,075 + AZOBR_RS08180 0.40 +0.5 1,724,076 - AZOBR_RS08180 0.40 +0.1
Or see this region's nucleotide sequence