Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07510 and AZOBR_RS07515 are separated by 143 nucleotides AZOBR_RS07515 and AZOBR_RS07520 are separated by 103 nucleotides AZOBR_RS07520 and AZOBR_RS07525 are separated by 106 nucleotides AZOBR_RS07525 and AZOBR_RS07530 are separated by 118 nucleotides
AZOBR_RS07510: AZOBR_RS07510 - CTP synthase, at 1,580,204 to 1,581,832
_RS07510
AZOBR_RS07515: AZOBR_RS07515 - carboxymethylenebutenolidase, at 1,581,976 to 1,582,674
_RS07515
AZOBR_RS07520: AZOBR_RS07520 - 2-dehydro-3-deoxyphosphooctonate aldolase, at 1,582,778 to 1,583,605
_RS07520
AZOBR_RS07525: AZOBR_RS07525 - DNA-binding protein, at 1,583,712 to 1,584,098
_RS07525
AZOBR_RS07530: AZOBR_RS07530 - pyrroloquinoline quinone biosynthesis protein PqqE, at 1,584,217 to 1,585,323
_RS07530
Position (kb)
1582
1583
1584 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1581.896 kb on + strand at 1581.896 kb on + strand at 1581.897 kb on - strand at 1581.897 kb on - strand at 1581.897 kb on - strand at 1581.939 kb on - strand at 1582.025 kb on - strand at 1582.025 kb on - strand at 1582.025 kb on - strand at 1582.102 kb on - strand, within AZOBR_RS07515 at 1582.402 kb on + strand, within AZOBR_RS07515 at 1582.402 kb on + strand, within AZOBR_RS07515 at 1582.402 kb on + strand, within AZOBR_RS07515 at 1582.406 kb on - strand, within AZOBR_RS07515 at 1582.561 kb on + strand, within AZOBR_RS07515 at 1584.069 kb on + strand at 1584.070 kb on - strand at 1584.070 kb on - strand at 1584.070 kb on - strand at 1584.197 kb on + strand at 1584.197 kb on + strand at 1584.197 kb on + strand at 1584.197 kb on + strand at 1584.198 kb on - strand at 1584.198 kb on - strand at 1584.198 kb on - strand at 1584.198 kb on - strand at 1584.437 kb on + strand, within AZOBR_RS07530
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 1,581,896 + +0.3 1,581,896 + +0.6 1,581,897 - +0.2 1,581,897 - -0.2 1,581,897 - +0.9 1,581,939 - -0.1 1,582,025 - +0.2 1,582,025 - -0.8 1,582,025 - -0.3 1,582,102 - AZOBR_RS07515 0.18 +0.2 1,582,402 + AZOBR_RS07515 0.61 -0.4 1,582,402 + AZOBR_RS07515 0.61 -0.3 1,582,402 + AZOBR_RS07515 0.61 -0.4 1,582,406 - AZOBR_RS07515 0.62 +0.8 1,582,561 + AZOBR_RS07515 0.84 +0.9 1,584,069 + -0.1 1,584,070 - +0.0 1,584,070 - +0.3 1,584,070 - -0.6 1,584,197 + +0.2 1,584,197 + -0.0 1,584,197 + -0.1 1,584,197 + -0.6 1,584,198 - +0.6 1,584,198 - +3.1 1,584,198 - -0.4 1,584,198 - +0.1 1,584,437 + AZOBR_RS07530 0.20 -2.6
Or see this region's nucleotide sequence