Experiment: 6-Pentyl-2H-pyran-2-one 0.6266795 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01235 and AZOBR_RS01240 are separated by 6 nucleotides AZOBR_RS01240 and AZOBR_RS01245 are separated by 179 nucleotides
AZOBR_RS01235: AZOBR_RS01235 - putative Copper resistance protein; putative fusion protein containing a copC-like domain (N-ter) and a copD-like domain (C-ter), at 252,866 to 254,485
_RS01235
AZOBR_RS01240: AZOBR_RS01240 - ABC transporter ATP-binding protein, at 254,492 to 255,553
_RS01240
AZOBR_RS01245: AZOBR_RS01245 - spermidine/putrescine ABC transporter substrate-binding protein, at 255,733 to 256,833
_RS01245
Position (kb) 254
255
256 Strain fitness (log2 ratio) -2
-1
0
1 at 253.920 kb on - strand, within AZOBR_RS01235 at 254.494 kb on - strand at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.886 kb on + strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.887 kb on - strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.985 kb on + strand, within AZOBR_RS01240 at 254.986 kb on - strand, within AZOBR_RS01240 at 254.986 kb on - strand, within AZOBR_RS01240 at 254.986 kb on - strand, within AZOBR_RS01240 at 255.553 kb on + strand at 255.553 kb on + strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.554 kb on - strand at 255.587 kb on - strand at 255.780 kb on - strand at 255.780 kb on - strand at 255.780 kb on - strand at 255.780 kb on - strand at 255.920 kb on + strand, within AZOBR_RS01245 at 255.920 kb on + strand, within AZOBR_RS01245 at 255.920 kb on + strand, within AZOBR_RS01245 at 255.921 kb on - strand, within AZOBR_RS01245 at 255.944 kb on + strand, within AZOBR_RS01245 at 255.945 kb on - strand, within AZOBR_RS01245 at 255.945 kb on - strand, within AZOBR_RS01245 at 255.965 kb on + strand, within AZOBR_RS01245 at 255.965 kb on + strand, within AZOBR_RS01245 at 255.965 kb on + strand, within AZOBR_RS01245 at 255.966 kb on - strand, within AZOBR_RS01245 at 255.966 kb on - strand, within AZOBR_RS01245 at 256.365 kb on - strand, within AZOBR_RS01245 at 256.365 kb on - strand, within AZOBR_RS01245 at 256.379 kb on + strand, within AZOBR_RS01245 at 256.379 kb on + strand, within AZOBR_RS01245 at 256.380 kb on - strand, within AZOBR_RS01245
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.6266795 mM remove 253,920 - AZOBR_RS01235 0.65 -0.0 254,494 - +0.4 254,886 + AZOBR_RS01240 0.37 -0.2 254,886 + AZOBR_RS01240 0.37 +0.5 254,886 + AZOBR_RS01240 0.37 +0.0 254,886 + AZOBR_RS01240 0.37 +0.1 254,886 + AZOBR_RS01240 0.37 -0.2 254,886 + AZOBR_RS01240 0.37 -0.1 254,887 - AZOBR_RS01240 0.37 -0.2 254,887 - AZOBR_RS01240 0.37 +1.0 254,887 - AZOBR_RS01240 0.37 -2.1 254,887 - AZOBR_RS01240 0.37 -0.1 254,985 + AZOBR_RS01240 0.46 +0.7 254,985 + AZOBR_RS01240 0.46 -0.3 254,985 + AZOBR_RS01240 0.46 +0.2 254,985 + AZOBR_RS01240 0.46 +0.1 254,985 + AZOBR_RS01240 0.46 -0.8 254,985 + AZOBR_RS01240 0.46 -0.6 254,985 + AZOBR_RS01240 0.46 +0.7 254,986 - AZOBR_RS01240 0.47 +0.2 254,986 - AZOBR_RS01240 0.47 -0.2 254,986 - AZOBR_RS01240 0.47 -0.8 255,553 + +0.9 255,553 + -0.9 255,554 - +0.9 255,554 - +1.4 255,554 - +0.1 255,554 - -0.2 255,554 - -0.1 255,554 - -0.2 255,587 - +0.0 255,780 - +0.1 255,780 - -0.5 255,780 - +0.6 255,780 - -0.2 255,920 + AZOBR_RS01245 0.17 -0.5 255,920 + AZOBR_RS01245 0.17 +0.0 255,920 + AZOBR_RS01245 0.17 +0.7 255,921 - AZOBR_RS01245 0.17 -1.4 255,944 + AZOBR_RS01245 0.19 -0.3 255,945 - AZOBR_RS01245 0.19 -0.6 255,945 - AZOBR_RS01245 0.19 +0.6 255,965 + AZOBR_RS01245 0.21 +0.8 255,965 + AZOBR_RS01245 0.21 -0.2 255,965 + AZOBR_RS01245 0.21 -0.6 255,966 - AZOBR_RS01245 0.21 -0.5 255,966 - AZOBR_RS01245 0.21 -0.4 256,365 - AZOBR_RS01245 0.57 -0.5 256,365 - AZOBR_RS01245 0.57 -0.2 256,379 + AZOBR_RS01245 0.59 +0.9 256,379 + AZOBR_RS01245 0.59 -0.1 256,380 - AZOBR_RS01245 0.59 -0.6
Or see this region's nucleotide sequence