Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22620 and AZOBR_RS22625 are separated by 193 nucleotides AZOBR_RS22625 and AZOBR_RS22630 are separated by 296 nucleotides AZOBR_RS22630 and AZOBR_RS22635 are separated by 143 nucleotides
AZOBR_RS22620: AZOBR_RS22620 - hypothetical protein, at 85,618 to 87,141
_RS22620
AZOBR_RS22625: AZOBR_RS22625 - glutamate dehydrogenase, at 87,335 to 88,594
_RS22625
AZOBR_RS22630: AZOBR_RS22630 - hypothetical protein, at 88,891 to 89,202
_RS22630
AZOBR_RS22635: AZOBR_RS22635 - hypothetical protein, at 89,346 to 89,597
_RS22635
Position (kb) 87
88
89 Strain fitness (log2 ratio) -2
-1
0
1
2 at 86.513 kb on + strand, within AZOBR_RS22620 at 86.513 kb on + strand, within AZOBR_RS22620 at 86.513 kb on + strand, within AZOBR_RS22620 at 86.513 kb on + strand, within AZOBR_RS22620 at 86.513 kb on + strand, within AZOBR_RS22620 at 86.513 kb on + strand, within AZOBR_RS22620 at 86.514 kb on - strand, within AZOBR_RS22620 at 86.514 kb on - strand, within AZOBR_RS22620 at 86.514 kb on - strand, within AZOBR_RS22620 at 86.514 kb on - strand, within AZOBR_RS22620 at 86.696 kb on + strand, within AZOBR_RS22620 at 87.026 kb on + strand at 87.026 kb on + strand at 87.026 kb on + strand at 87.026 kb on + strand at 87.026 kb on + strand at 87.027 kb on - strand at 87.027 kb on - strand at 87.027 kb on - strand at 87.027 kb on - strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.262 kb on + strand at 87.263 kb on - strand at 87.263 kb on - strand at 87.263 kb on - strand at 87.263 kb on - strand at 87.263 kb on - strand at 87.286 kb on + strand at 87.286 kb on + strand at 87.405 kb on + strand at 87.406 kb on - strand at 87.415 kb on + strand at 87.516 kb on + strand, within AZOBR_RS22625 at 87.516 kb on + strand, within AZOBR_RS22625 at 87.516 kb on + strand, within AZOBR_RS22625 at 87.517 kb on - strand, within AZOBR_RS22625 at 87.517 kb on - strand, within AZOBR_RS22625 at 87.519 kb on + strand, within AZOBR_RS22625 at 87.519 kb on + strand, within AZOBR_RS22625 at 87.520 kb on - strand, within AZOBR_RS22625 at 87.520 kb on - strand, within AZOBR_RS22625 at 88.017 kb on + strand, within AZOBR_RS22625 at 88.017 kb on + strand, within AZOBR_RS22625 at 88.018 kb on - strand, within AZOBR_RS22625 at 88.018 kb on - strand, within AZOBR_RS22625 at 88.018 kb on - strand, within AZOBR_RS22625 at 88.161 kb on + strand, within AZOBR_RS22625 at 88.161 kb on + strand, within AZOBR_RS22625 at 88.221 kb on + strand, within AZOBR_RS22625 at 88.221 kb on + strand, within AZOBR_RS22625 at 88.221 kb on + strand, within AZOBR_RS22625 at 88.222 kb on - strand, within AZOBR_RS22625 at 88.222 kb on - strand, within AZOBR_RS22625 at 88.222 kb on - strand, within AZOBR_RS22625 at 88.299 kb on + strand, within AZOBR_RS22625 at 88.503 kb on + strand at 88.675 kb on - strand at 88.675 kb on - strand at 88.680 kb on + strand at 88.681 kb on - strand at 88.695 kb on + strand at 88.809 kb on + strand at 89.224 kb on + strand at 89.225 kb on - strand at 89.518 kb on + strand, within AZOBR_RS22635 at 89.518 kb on + strand, within AZOBR_RS22635 at 89.518 kb on + strand, within AZOBR_RS22635 at 89.519 kb on - strand, within AZOBR_RS22635
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM remove 86,513 + AZOBR_RS22620 0.59 -1.3 86,513 + AZOBR_RS22620 0.59 -0.1 86,513 + AZOBR_RS22620 0.59 +0.5 86,513 + AZOBR_RS22620 0.59 -0.9 86,513 + AZOBR_RS22620 0.59 -0.5 86,513 + AZOBR_RS22620 0.59 -0.1 86,514 - AZOBR_RS22620 0.59 -1.2 86,514 - AZOBR_RS22620 0.59 -0.0 86,514 - AZOBR_RS22620 0.59 -0.3 86,514 - AZOBR_RS22620 0.59 -0.5 86,696 + AZOBR_RS22620 0.71 -0.4 87,026 + -0.0 87,026 + +0.0 87,026 + -0.1 87,026 + +0.0 87,026 + +0.1 87,027 - +0.6 87,027 - -2.0 87,027 - -0.6 87,027 - +1.0 87,262 + -0.4 87,262 + -0.2 87,262 + -0.5 87,262 + -0.4 87,262 + -0.7 87,262 + +0.4 87,262 + +1.1 87,262 + +0.1 87,262 + +0.1 87,263 - -0.0 87,263 - +0.5 87,263 - +0.4 87,263 - -0.4 87,263 - +2.0 87,286 + +0.7 87,286 + -0.3 87,405 + -1.4 87,406 - -0.4 87,415 + +0.2 87,516 + AZOBR_RS22625 0.14 -0.2 87,516 + AZOBR_RS22625 0.14 +0.1 87,516 + AZOBR_RS22625 0.14 +0.3 87,517 - AZOBR_RS22625 0.14 -0.7 87,517 - AZOBR_RS22625 0.14 +0.4 87,519 + AZOBR_RS22625 0.15 -0.3 87,519 + AZOBR_RS22625 0.15 -0.1 87,520 - AZOBR_RS22625 0.15 +0.2 87,520 - AZOBR_RS22625 0.15 +0.3 88,017 + AZOBR_RS22625 0.54 -0.3 88,017 + AZOBR_RS22625 0.54 -0.6 88,018 - AZOBR_RS22625 0.54 -0.0 88,018 - AZOBR_RS22625 0.54 +0.6 88,018 - AZOBR_RS22625 0.54 +1.3 88,161 + AZOBR_RS22625 0.66 -0.4 88,161 + AZOBR_RS22625 0.66 +0.1 88,221 + AZOBR_RS22625 0.70 -0.4 88,221 + AZOBR_RS22625 0.70 -0.0 88,221 + AZOBR_RS22625 0.70 +0.4 88,222 - AZOBR_RS22625 0.70 +0.3 88,222 - AZOBR_RS22625 0.70 -0.4 88,222 - AZOBR_RS22625 0.70 +2.0 88,299 + AZOBR_RS22625 0.77 +0.4 88,503 + -0.4 88,675 - +0.1 88,675 - -0.1 88,680 + -0.7 88,681 - +0.2 88,695 + -1.4 88,809 + +0.2 89,224 + +0.6 89,225 - +1.4 89,518 + AZOBR_RS22635 0.68 +0.2 89,518 + AZOBR_RS22635 0.68 +0.1 89,518 + AZOBR_RS22635 0.68 -0.5 89,519 - AZOBR_RS22635 0.69 +0.7
Or see this region's nucleotide sequence