Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS03310 and AZOBR_RS03315 are separated by 5 nucleotides AZOBR_RS03315 and AZOBR_RS03320 are separated by 230 nucleotides AZOBR_RS03320 and AZOBR_RS03325 are separated by 99 nucleotides
AZOBR_RS03310: AZOBR_RS03310 - ribonuclease P, at 700,840 to 701,211
_RS03310
AZOBR_RS03315: AZOBR_RS03315 - 50S ribosomal protein L34, at 701,217 to 701,351
_RS03315
AZOBR_RS03320: AZOBR_RS03320 - hypothetical protein, at 701,582 to 703,084
_RS03320
AZOBR_RS03325: AZOBR_RS03325 - hypothetical protein, at 703,184 to 704,041
_RS03325
Position (kb) 701
702
703
704 Strain fitness (log2 ratio) -2
-1
0
1 at 700.607 kb on - strand at 701.904 kb on - strand, within AZOBR_RS03320 at 702.021 kb on - strand, within AZOBR_RS03320 at 702.170 kb on + strand, within AZOBR_RS03320 at 702.279 kb on - strand, within AZOBR_RS03320 at 702.590 kb on + strand, within AZOBR_RS03320 at 702.590 kb on + strand, within AZOBR_RS03320 at 702.590 kb on - strand, within AZOBR_RS03320 at 702.591 kb on - strand, within AZOBR_RS03320 at 702.591 kb on - strand, within AZOBR_RS03320 at 702.591 kb on - strand, within AZOBR_RS03320 at 702.674 kb on + strand, within AZOBR_RS03320 at 702.675 kb on - strand, within AZOBR_RS03320 at 702.675 kb on - strand, within AZOBR_RS03320 at 702.779 kb on + strand, within AZOBR_RS03320 at 702.779 kb on + strand, within AZOBR_RS03320 at 703.425 kb on + strand, within AZOBR_RS03325 at 703.426 kb on - strand, within AZOBR_RS03325 at 703.426 kb on - strand, within AZOBR_RS03325 at 703.474 kb on - strand, within AZOBR_RS03325 at 703.474 kb on - strand, within AZOBR_RS03325 at 703.474 kb on - strand, within AZOBR_RS03325 at 703.572 kb on + strand, within AZOBR_RS03325 at 703.572 kb on + strand, within AZOBR_RS03325 at 703.572 kb on + strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.573 kb on - strand, within AZOBR_RS03325 at 703.627 kb on - strand, within AZOBR_RS03325 at 703.627 kb on - strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.731 kb on + strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.732 kb on - strand, within AZOBR_RS03325 at 703.797 kb on + strand, within AZOBR_RS03325 at 703.797 kb on + strand, within AZOBR_RS03325 at 703.797 kb on + strand, within AZOBR_RS03325 at 703.798 kb on - strand, within AZOBR_RS03325 at 703.798 kb on - strand, within AZOBR_RS03325 at 703.836 kb on + strand, within AZOBR_RS03325 at 703.837 kb on - strand, within AZOBR_RS03325 at 703.869 kb on + strand, within AZOBR_RS03325
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM remove 700,607 - +0.4 701,904 - AZOBR_RS03320 0.21 -1.1 702,021 - AZOBR_RS03320 0.29 -0.2 702,170 + AZOBR_RS03320 0.39 +0.0 702,279 - AZOBR_RS03320 0.46 -0.4 702,590 + AZOBR_RS03320 0.67 +0.1 702,590 + AZOBR_RS03320 0.67 -0.1 702,590 - AZOBR_RS03320 0.67 -0.5 702,591 - AZOBR_RS03320 0.67 +0.1 702,591 - AZOBR_RS03320 0.67 -0.4 702,591 - AZOBR_RS03320 0.67 -0.5 702,674 + AZOBR_RS03320 0.73 -1.0 702,675 - AZOBR_RS03320 0.73 -0.3 702,675 - AZOBR_RS03320 0.73 -0.5 702,779 + AZOBR_RS03320 0.80 -1.2 702,779 + AZOBR_RS03320 0.80 +0.1 703,425 + AZOBR_RS03325 0.28 +0.7 703,426 - AZOBR_RS03325 0.28 -0.5 703,426 - AZOBR_RS03325 0.28 -0.3 703,474 - AZOBR_RS03325 0.34 -0.5 703,474 - AZOBR_RS03325 0.34 +0.1 703,474 - AZOBR_RS03325 0.34 -0.1 703,572 + AZOBR_RS03325 0.45 -0.9 703,572 + AZOBR_RS03325 0.45 -1.0 703,572 + AZOBR_RS03325 0.45 -0.4 703,573 - AZOBR_RS03325 0.45 -0.0 703,573 - AZOBR_RS03325 0.45 -0.6 703,573 - AZOBR_RS03325 0.45 -0.0 703,573 - AZOBR_RS03325 0.45 -0.2 703,627 - AZOBR_RS03325 0.52 +0.1 703,627 - AZOBR_RS03325 0.52 -0.2 703,731 + AZOBR_RS03325 0.64 +0.5 703,731 + AZOBR_RS03325 0.64 -1.1 703,731 + AZOBR_RS03325 0.64 -0.1 703,731 + AZOBR_RS03325 0.64 +0.4 703,731 + AZOBR_RS03325 0.64 +0.1 703,731 + AZOBR_RS03325 0.64 -2.0 703,732 - AZOBR_RS03325 0.64 -0.2 703,732 - AZOBR_RS03325 0.64 -0.0 703,732 - AZOBR_RS03325 0.64 -0.5 703,732 - AZOBR_RS03325 0.64 -0.5 703,732 - AZOBR_RS03325 0.64 +0.0 703,732 - AZOBR_RS03325 0.64 -0.1 703,732 - AZOBR_RS03325 0.64 +0.4 703,732 - AZOBR_RS03325 0.64 -1.3 703,797 + AZOBR_RS03325 0.71 +1.6 703,797 + AZOBR_RS03325 0.71 -0.8 703,797 + AZOBR_RS03325 0.71 -0.5 703,798 - AZOBR_RS03325 0.72 -1.0 703,798 - AZOBR_RS03325 0.72 -0.4 703,836 + AZOBR_RS03325 0.76 -0.1 703,837 - AZOBR_RS03325 0.76 +0.3 703,869 + AZOBR_RS03325 0.80 -0.8
Or see this region's nucleotide sequence