Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS00090 and AZOBR_RS00095 are separated by 141 nucleotides AZOBR_RS00095 and AZOBR_RS00100 are separated by 49 nucleotides AZOBR_RS00100 and AZOBR_RS00105 are separated by 442 nucleotides
AZOBR_RS00090: AZOBR_RS00090 - hypothetical protein, at 7,368 to 8,156
_RS00090
AZOBR_RS00095: AZOBR_RS00095 - MFS transporter permease, at 8,298 to 9,482
_RS00095
AZOBR_RS00100: AZOBR_RS00100 - membrane protein, at 9,532 to 9,975
_RS00100
AZOBR_RS00105: AZOBR_RS00105 - ornithine decarboxylase, at 10,418 to 11,554
_RS00105
Position (kb)
8
9
10 Strain fitness (log2 ratio)
-1
0
1
2
3 at 7.310 kb on - strand at 7.310 kb on - strand at 7.392 kb on + strand at 7.394 kb on + strand at 7.395 kb on - strand at 7.395 kb on - strand at 7.395 kb on - strand at 7.395 kb on - strand at 7.403 kb on + strand at 7.404 kb on - strand at 7.404 kb on - strand at 7.710 kb on + strand, within AZOBR_RS00090 at 7.710 kb on + strand, within AZOBR_RS00090 at 7.710 kb on + strand, within AZOBR_RS00090 at 8.013 kb on + strand, within AZOBR_RS00090 at 8.013 kb on + strand, within AZOBR_RS00090 at 8.013 kb on + strand, within AZOBR_RS00090 at 8.014 kb on - strand, within AZOBR_RS00090 at 8.014 kb on - strand, within AZOBR_RS00090 at 8.258 kb on - strand at 8.377 kb on - strand at 8.377 kb on - strand at 8.485 kb on - strand, within AZOBR_RS00095 at 8.544 kb on + strand, within AZOBR_RS00095 at 8.544 kb on + strand, within AZOBR_RS00095 at 8.544 kb on + strand, within AZOBR_RS00095 at 8.703 kb on + strand, within AZOBR_RS00095 at 8.703 kb on + strand, within AZOBR_RS00095 at 8.704 kb on - strand, within AZOBR_RS00095 at 8.907 kb on + strand, within AZOBR_RS00095 at 9.546 kb on - strand at 9.602 kb on + strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.603 kb on - strand, within AZOBR_RS00100 at 9.798 kb on - strand, within AZOBR_RS00100 at 9.989 kb on - strand at 10.046 kb on + strand at 10.067 kb on + strand at 10.068 kb on - strand at 10.068 kb on - strand at 10.144 kb on + strand at 10.144 kb on + strand at 10.145 kb on - strand at 10.169 kb on + strand at 10.170 kb on - strand at 10.193 kb on + strand at 10.426 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM remove 7,310 - -0.2 7,310 - +0.1 7,392 + +0.3 7,394 + +0.1 7,395 - -0.5 7,395 - +0.3 7,395 - -1.3 7,395 - +1.0 7,403 + -0.9 7,404 - +0.1 7,404 - +0.5 7,710 + AZOBR_RS00090 0.43 -1.3 7,710 + AZOBR_RS00090 0.43 -0.5 7,710 + AZOBR_RS00090 0.43 -0.4 8,013 + AZOBR_RS00090 0.82 -0.1 8,013 + AZOBR_RS00090 0.82 -0.3 8,013 + AZOBR_RS00090 0.82 -0.3 8,014 - AZOBR_RS00090 0.82 -0.1 8,014 - AZOBR_RS00090 0.82 -0.3 8,258 - +0.1 8,377 - -0.2 8,377 - -0.1 8,485 - AZOBR_RS00095 0.16 +0.3 8,544 + AZOBR_RS00095 0.21 +0.3 8,544 + AZOBR_RS00095 0.21 +0.1 8,544 + AZOBR_RS00095 0.21 -0.4 8,703 + AZOBR_RS00095 0.34 +0.2 8,703 + AZOBR_RS00095 0.34 +3.1 8,704 - AZOBR_RS00095 0.34 -0.4 8,907 + AZOBR_RS00095 0.51 +1.4 9,546 - +0.1 9,602 + AZOBR_RS00100 0.16 -0.8 9,603 - AZOBR_RS00100 0.16 -0.6 9,603 - AZOBR_RS00100 0.16 +0.4 9,603 - AZOBR_RS00100 0.16 -1.1 9,603 - AZOBR_RS00100 0.16 +2.1 9,798 - AZOBR_RS00100 0.60 -0.3 9,989 - -1.3 10,046 + +2.1 10,067 + -1.1 10,068 - -0.3 10,068 - +0.5 10,144 + +0.1 10,144 + -0.3 10,145 - +2.1 10,169 + -0.8 10,170 - +1.1 10,193 + +0.3 10,426 + -0.8
Or see this region's nucleotide sequence