Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS27830 and AZOBR_RS27835 are separated by 68 nucleotides AZOBR_RS27835 and AZOBR_RS27840 are separated by 47 nucleotides AZOBR_RS27840 and AZOBR_RS27845 overlap by 4 nucleotides
AZOBR_RS27830: AZOBR_RS27830 - proline racemase, at 413,088 to 414,101
_RS27830
AZOBR_RS27835: AZOBR_RS27835 - polyamine ABC transporter permease, at 414,170 to 414,958
_RS27835
AZOBR_RS27840: AZOBR_RS27840 - polyamine ABC transporter permease, at 415,006 to 415,818
_RS27840
AZOBR_RS27845: AZOBR_RS27845 - polyamine ABC transporter ATPase, at 415,815 to 416,912
_RS27845
Position (kb) 414
415 Strain fitness (log2 ratio) -1
0
1
2
3 at 413.383 kb on + strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.384 kb on - strand, within AZOBR_RS27830 at 413.578 kb on + strand, within AZOBR_RS27830 at 413.579 kb on - strand, within AZOBR_RS27830 at 413.657 kb on - strand, within AZOBR_RS27830 at 413.861 kb on - strand at 413.968 kb on + strand, within AZOBR_RS27830 at 414.020 kb on - strand at 414.070 kb on + strand at 414.285 kb on + strand, within AZOBR_RS27835 at 414.285 kb on + strand, within AZOBR_RS27835 at 414.286 kb on - strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.294 kb on + strand, within AZOBR_RS27835 at 414.295 kb on - strand, within AZOBR_RS27835 at 414.295 kb on - strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.603 kb on + strand, within AZOBR_RS27835 at 414.604 kb on - strand, within AZOBR_RS27835 at 414.604 kb on - strand, within AZOBR_RS27835 at 414.789 kb on + strand, within AZOBR_RS27835 at 414.855 kb on + strand, within AZOBR_RS27835 at 414.855 kb on + strand, within AZOBR_RS27835 at 414.909 kb on + strand at 414.909 kb on + strand at 415.064 kb on + strand at 415.089 kb on - strand, within AZOBR_RS27840 at 415.154 kb on + strand, within AZOBR_RS27840 at 415.154 kb on + strand, within AZOBR_RS27840 at 415.155 kb on - strand, within AZOBR_RS27840 at 415.343 kb on + strand, within AZOBR_RS27840 at 415.344 kb on - strand, within AZOBR_RS27840 at 415.559 kb on + strand, within AZOBR_RS27840 at 415.560 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.563 kb on - strand, within AZOBR_RS27840 at 415.670 kb on + strand, within AZOBR_RS27840 at 415.670 kb on + strand, within AZOBR_RS27840 at 415.671 kb on - strand, within AZOBR_RS27840
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM remove 413,383 + AZOBR_RS27830 0.29 -0.8 413,384 - AZOBR_RS27830 0.29 +0.0 413,384 - AZOBR_RS27830 0.29 +1.3 413,384 - AZOBR_RS27830 0.29 +0.1 413,384 - AZOBR_RS27830 0.29 +1.1 413,578 + AZOBR_RS27830 0.48 -0.8 413,579 - AZOBR_RS27830 0.48 +1.7 413,657 - AZOBR_RS27830 0.56 -0.4 413,861 - -0.2 413,968 + AZOBR_RS27830 0.87 -0.1 414,020 - -0.4 414,070 + +0.0 414,285 + AZOBR_RS27835 0.15 -0.8 414,285 + AZOBR_RS27835 0.15 -0.1 414,286 - AZOBR_RS27835 0.15 +0.2 414,294 + AZOBR_RS27835 0.16 -0.8 414,294 + AZOBR_RS27835 0.16 -1.2 414,294 + AZOBR_RS27835 0.16 +0.4 414,295 - AZOBR_RS27835 0.16 -0.3 414,295 - AZOBR_RS27835 0.16 -0.3 414,603 + AZOBR_RS27835 0.55 +0.3 414,603 + AZOBR_RS27835 0.55 -0.4 414,603 + AZOBR_RS27835 0.55 +0.2 414,604 - AZOBR_RS27835 0.55 +0.4 414,604 - AZOBR_RS27835 0.55 +0.6 414,789 + AZOBR_RS27835 0.78 -0.1 414,855 + AZOBR_RS27835 0.87 +0.9 414,855 + AZOBR_RS27835 0.87 -0.3 414,909 + -0.4 414,909 + +0.1 415,064 + -0.7 415,089 - AZOBR_RS27840 0.10 +0.3 415,154 + AZOBR_RS27840 0.18 -0.1 415,154 + AZOBR_RS27840 0.18 -1.1 415,155 - AZOBR_RS27840 0.18 -0.2 415,343 + AZOBR_RS27840 0.41 -0.8 415,344 - AZOBR_RS27840 0.42 -0.0 415,559 + AZOBR_RS27840 0.68 +3.1 415,560 - AZOBR_RS27840 0.68 -0.1 415,563 - AZOBR_RS27840 0.69 -0.5 415,563 - AZOBR_RS27840 0.69 +0.2 415,563 - AZOBR_RS27840 0.69 +0.6 415,563 - AZOBR_RS27840 0.69 +0.3 415,670 + AZOBR_RS27840 0.82 +0.1 415,670 + AZOBR_RS27840 0.82 -0.2 415,671 - AZOBR_RS27840 0.82 +0.6
Or see this region's nucleotide sequence