Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04220 and AZOBR_RS04225 are separated by 142 nucleotides AZOBR_RS04225 and AZOBR_RS04230 are separated by 99 nucleotides
AZOBR_RS04220: AZOBR_RS04220 - hypothetical protein, at 888,538 to 889,107
_RS04220
AZOBR_RS04225: AZOBR_RS04225 - isoprenoid biosynthesis protein, at 889,250 to 889,918
_RS04225
AZOBR_RS04230: AZOBR_RS04230 - indole-3-pyruvate decarboxylase, at 890,018 to 891,655
_RS04230
Position (kb) 889
890 Strain fitness (log2 ratio) -1
0
1 at 888.277 kb on + strand at 888.278 kb on - strand at 888.292 kb on + strand at 888.293 kb on - strand at 888.386 kb on - strand at 888.447 kb on - strand at 888.448 kb on + strand at 888.449 kb on - strand at 888.786 kb on - strand, within AZOBR_RS04220 at 888.891 kb on - strand, within AZOBR_RS04220 at 889.163 kb on + strand at 889.251 kb on + strand at 889.252 kb on - strand at 889.329 kb on + strand, within AZOBR_RS04225 at 889.329 kb on + strand, within AZOBR_RS04225 at 889.329 kb on + strand, within AZOBR_RS04225 at 889.330 kb on - strand, within AZOBR_RS04225 at 889.330 kb on - strand, within AZOBR_RS04225 at 889.330 kb on - strand, within AZOBR_RS04225 at 889.330 kb on - strand, within AZOBR_RS04225 at 889.867 kb on - strand at 889.867 kb on - strand at 889.867 kb on - strand at 889.983 kb on - strand at 889.983 kb on - strand at 889.999 kb on + strand at 889.999 kb on + strand at 889.999 kb on + strand at 890.000 kb on - strand at 890.000 kb on - strand at 890.005 kb on + strand at 890.019 kb on + strand at 890.721 kb on + strand, within AZOBR_RS04230 at 890.730 kb on + strand, within AZOBR_RS04230 at 890.895 kb on + strand, within AZOBR_RS04230 at 890.896 kb on - strand, within AZOBR_RS04230 at 890.896 kb on - strand, within AZOBR_RS04230 at 890.896 kb on - strand, within AZOBR_RS04230 at 890.896 kb on - strand, within AZOBR_RS04230
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM remove 888,277 + -1.1 888,278 - +1.0 888,292 + -0.3 888,293 - -0.3 888,386 - +0.1 888,447 - +0.2 888,448 + -0.4 888,449 - -0.4 888,786 - AZOBR_RS04220 0.44 -0.3 888,891 - AZOBR_RS04220 0.62 +0.0 889,163 + +0.3 889,251 + -0.0 889,252 - +0.1 889,329 + AZOBR_RS04225 0.12 -0.5 889,329 + AZOBR_RS04225 0.12 -0.3 889,329 + AZOBR_RS04225 0.12 +0.1 889,330 - AZOBR_RS04225 0.12 -1.3 889,330 - AZOBR_RS04225 0.12 -1.0 889,330 - AZOBR_RS04225 0.12 -0.2 889,330 - AZOBR_RS04225 0.12 +0.1 889,867 - -0.1 889,867 - -0.1 889,867 - +0.0 889,983 - -0.3 889,983 - -0.4 889,999 + -0.2 889,999 + -0.4 889,999 + +0.1 890,000 - +0.5 890,000 - +0.0 890,005 + -0.2 890,019 + +0.2 890,721 + AZOBR_RS04230 0.43 -0.1 890,730 + AZOBR_RS04230 0.43 +0.4 890,895 + AZOBR_RS04230 0.54 +0.3 890,896 - AZOBR_RS04230 0.54 +1.4 890,896 - AZOBR_RS04230 0.54 +0.5 890,896 - AZOBR_RS04230 0.54 +0.0 890,896 - AZOBR_RS04230 0.54 -0.4
Or see this region's nucleotide sequence