Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26795 and AZOBR_RS26800 overlap by 4 nucleotides AZOBR_RS26800 and AZOBR_RS26805 are separated by 427 nucleotides AZOBR_RS26805 and AZOBR_RS26810 are separated by 60 nucleotides
AZOBR_RS26795: AZOBR_RS26795 - hypothetical protein, at 161,608 to 162,234
_RS26795
AZOBR_RS26800: AZOBR_RS26800 - hypothetical protein, at 162,231 to 162,803
_RS26800
AZOBR_RS26805: AZOBR_RS26805 - malonyl-CoA synthase, at 163,231 to 164,769
_RS26805
AZOBR_RS26810: AZOBR_RS26810 - quinone oxidoreductase, at 164,830 to 165,810
_RS26810
Position (kb) 163
164
165 Strain fitness (log2 ratio) -1
0
1 at 162.340 kb on - strand, within AZOBR_RS26800 at 162.496 kb on - strand, within AZOBR_RS26800 at 162.741 kb on + strand, within AZOBR_RS26800 at 162.742 kb on - strand, within AZOBR_RS26800 at 162.742 kb on - strand, within AZOBR_RS26800 at 162.802 kb on - strand at 162.802 kb on - strand at 163.355 kb on + strand at 163.355 kb on + strand at 163.544 kb on + strand, within AZOBR_RS26805 at 163.545 kb on - strand, within AZOBR_RS26805 at 163.683 kb on - strand, within AZOBR_RS26805 at 163.791 kb on - strand, within AZOBR_RS26805 at 164.003 kb on + strand, within AZOBR_RS26805 at 164.004 kb on - strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.102 kb on + strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.103 kb on - strand, within AZOBR_RS26805 at 164.276 kb on + strand, within AZOBR_RS26805 at 164.471 kb on + strand, within AZOBR_RS26805 at 164.471 kb on + strand, within AZOBR_RS26805 at 164.492 kb on + strand, within AZOBR_RS26805 at 164.493 kb on - strand, within AZOBR_RS26805 at 164.493 kb on - strand, within AZOBR_RS26805 at 164.514 kb on - strand, within AZOBR_RS26805 at 164.543 kb on + strand, within AZOBR_RS26805 at 164.543 kb on + strand, within AZOBR_RS26805 at 164.660 kb on + strand at 164.753 kb on + strand at 165.168 kb on - strand, within AZOBR_RS26810 at 165.168 kb on - strand, within AZOBR_RS26810 at 165.168 kb on - strand, within AZOBR_RS26810 at 165.420 kb on - strand, within AZOBR_RS26810 at 165.420 kb on - strand, within AZOBR_RS26810 at 165.674 kb on + strand, within AZOBR_RS26810 at 165.674 kb on + strand, within AZOBR_RS26810 at 165.675 kb on - strand, within AZOBR_RS26810 at 165.675 kb on - strand, within AZOBR_RS26810
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM remove 162,340 - AZOBR_RS26800 0.19 -0.1 162,496 - AZOBR_RS26800 0.46 +0.1 162,741 + AZOBR_RS26800 0.89 -0.5 162,742 - AZOBR_RS26800 0.89 -1.1 162,742 - AZOBR_RS26800 0.89 -1.3 162,802 - -1.4 162,802 - +0.8 163,355 + +0.0 163,355 + -0.4 163,544 + AZOBR_RS26805 0.20 +0.3 163,545 - AZOBR_RS26805 0.20 -0.2 163,683 - AZOBR_RS26805 0.29 +0.3 163,791 - AZOBR_RS26805 0.36 -0.5 164,003 + AZOBR_RS26805 0.50 -0.3 164,004 - AZOBR_RS26805 0.50 -0.3 164,102 + AZOBR_RS26805 0.57 -0.9 164,102 + AZOBR_RS26805 0.57 +0.6 164,102 + AZOBR_RS26805 0.57 -0.0 164,102 + AZOBR_RS26805 0.57 +1.1 164,102 + AZOBR_RS26805 0.57 -0.1 164,103 - AZOBR_RS26805 0.57 +1.3 164,103 - AZOBR_RS26805 0.57 +0.2 164,103 - AZOBR_RS26805 0.57 +1.1 164,103 - AZOBR_RS26805 0.57 -0.9 164,103 - AZOBR_RS26805 0.57 -0.8 164,276 + AZOBR_RS26805 0.68 -0.4 164,471 + AZOBR_RS26805 0.81 -0.6 164,471 + AZOBR_RS26805 0.81 -0.5 164,492 + AZOBR_RS26805 0.82 -0.4 164,493 - AZOBR_RS26805 0.82 -1.3 164,493 - AZOBR_RS26805 0.82 +0.3 164,514 - AZOBR_RS26805 0.83 -0.7 164,543 + AZOBR_RS26805 0.85 +0.2 164,543 + AZOBR_RS26805 0.85 +0.5 164,660 + -1.0 164,753 + +0.5 165,168 - AZOBR_RS26810 0.34 +0.3 165,168 - AZOBR_RS26810 0.34 -0.1 165,168 - AZOBR_RS26810 0.34 -0.4 165,420 - AZOBR_RS26810 0.60 -0.2 165,420 - AZOBR_RS26810 0.60 -0.4 165,674 + AZOBR_RS26810 0.86 +0.2 165,674 + AZOBR_RS26810 0.86 -1.7 165,675 - AZOBR_RS26810 0.86 -0.7 165,675 - AZOBR_RS26810 0.86 +0.2
Or see this region's nucleotide sequence