Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS06745

Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS06735 and AZOBR_RS06740 overlap by 23 nucleotidesAZOBR_RS06740 and AZOBR_RS06745 are separated by 194 nucleotidesAZOBR_RS06745 and AZOBR_RS06750 are separated by 95 nucleotidesAZOBR_RS06750 and AZOBR_RS06755 are separated by 143 nucleotides AZOBR_RS06735: AZOBR_RS06735 - hypothetical protein, at 1,432,154 to 1,432,864 _RS06735 AZOBR_RS06740: AZOBR_RS06740 - nuclease, at 1,432,842 to 1,433,393 _RS06740 AZOBR_RS06745: AZOBR_RS06745 - regulator, at 1,433,588 to 1,434,367 _RS06745 AZOBR_RS06750: AZOBR_RS06750 - transglycosylase, at 1,434,463 to 1,434,720 _RS06750 AZOBR_RS06755: AZOBR_RS06755 - ribulose-phosphate 3-epimerase, at 1,434,864 to 1,435,520 _RS06755 Position (kb) 1433 1434 1435Strain fitness (log2 ratio) -1 0 1 2at 1432.973 kb on - strand, within AZOBR_RS06740at 1432.973 kb on - strand, within AZOBR_RS06740at 1433.003 kb on + strand, within AZOBR_RS06740at 1433.283 kb on + strand, within AZOBR_RS06740at 1433.284 kb on - strand, within AZOBR_RS06740at 1433.284 kb on - strand, within AZOBR_RS06740at 1433.485 kb on + strandat 1433.486 kb on - strandat 1433.612 kb on + strandat 1433.613 kb on - strandat 1433.760 kb on - strand, within AZOBR_RS06745at 1433.870 kb on + strand, within AZOBR_RS06745at 1433.870 kb on + strand, within AZOBR_RS06745at 1433.871 kb on - strand, within AZOBR_RS06745at 1433.871 kb on - strand, within AZOBR_RS06745at 1433.871 kb on - strand, within AZOBR_RS06745at 1434.497 kb on + strand, within AZOBR_RS06750at 1434.497 kb on + strand, within AZOBR_RS06750at 1434.498 kb on - strand, within AZOBR_RS06750at 1434.587 kb on + strand, within AZOBR_RS06750at 1434.587 kb on + strand, within AZOBR_RS06750at 1434.587 kb on + strand, within AZOBR_RS06750at 1434.588 kb on - strand, within AZOBR_RS06750at 1434.588 kb on - strand, within AZOBR_RS06750at 1434.715 kb on - strandat 1434.720 kb on + strandat 1434.766 kb on + strandat 1434.767 kb on - strandat 1434.767 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
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1,432,973 - AZOBR_RS06740 0.24 -0.6
1,432,973 - AZOBR_RS06740 0.24 -0.5
1,433,003 + AZOBR_RS06740 0.29 +0.9
1,433,283 + AZOBR_RS06740 0.80 -0.1
1,433,284 - AZOBR_RS06740 0.80 +0.3
1,433,284 - AZOBR_RS06740 0.80 +0.3
1,433,485 + -0.1
1,433,486 - +0.8
1,433,612 + -0.2
1,433,613 - +0.0
1,433,760 - AZOBR_RS06745 0.22 -0.4
1,433,870 + AZOBR_RS06745 0.36 +0.6
1,433,870 + AZOBR_RS06745 0.36 +0.3
1,433,871 - AZOBR_RS06745 0.36 +0.7
1,433,871 - AZOBR_RS06745 0.36 +0.8
1,433,871 - AZOBR_RS06745 0.36 -0.5
1,434,497 + AZOBR_RS06750 0.13 +1.3
1,434,497 + AZOBR_RS06750 0.13 +1.9
1,434,498 - AZOBR_RS06750 0.14 +0.8
1,434,587 + AZOBR_RS06750 0.48 +0.4
1,434,587 + AZOBR_RS06750 0.48 -0.2
1,434,587 + AZOBR_RS06750 0.48 -0.9
1,434,588 - AZOBR_RS06750 0.48 +0.2
1,434,588 - AZOBR_RS06750 0.48 +0.1
1,434,715 - +0.5
1,434,720 + +0.4
1,434,766 + -0.5
1,434,767 - -0.1
1,434,767 - +0.2

Or see this region's nucleotide sequence