Experiment: 6-Pentyl-2H-pyran-2-one 0.7162051667 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04785 and AZOBR_RS04790 are separated by 175 nucleotides
AZOBR_RS04785: AZOBR_RS04785 - ATPase AAA, at 1,005,171 to 1,007,105
_RS04785
AZOBR_RS04790: AZOBR_RS04790 - acetoin catabolism protein X, at 1,007,281 to 1,008,339
_RS04790
Position (kb)
1005
1006
1007
1008 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1004.188 kb on - strand at 1004.318 kb on + strand at 1004.318 kb on + strand at 1004.319 kb on - strand at 1004.319 kb on - strand at 1004.780 kb on + strand at 1004.780 kb on + strand at 1004.780 kb on + strand at 1004.780 kb on + strand at 1004.781 kb on - strand at 1004.790 kb on + strand at 1004.791 kb on - strand at 1004.791 kb on - strand at 1004.873 kb on + strand at 1004.873 kb on + strand at 1005.111 kb on + strand at 1005.315 kb on + strand at 1005.315 kb on + strand at 1005.315 kb on + strand at 1005.315 kb on + strand at 1005.315 kb on + strand at 1005.315 kb on + strand at 1005.316 kb on - strand at 1005.316 kb on - strand at 1005.316 kb on - strand at 1005.402 kb on + strand, within AZOBR_RS04785 at 1005.427 kb on - strand, within AZOBR_RS04785 at 1005.427 kb on - strand, within AZOBR_RS04785 at 1005.516 kb on + strand, within AZOBR_RS04785 at 1005.517 kb on - strand, within AZOBR_RS04785 at 1005.735 kb on + strand, within AZOBR_RS04785 at 1005.735 kb on + strand, within AZOBR_RS04785 at 1005.736 kb on - strand, within AZOBR_RS04785 at 1005.736 kb on - strand, within AZOBR_RS04785 at 1005.736 kb on - strand, within AZOBR_RS04785 at 1005.736 kb on - strand, within AZOBR_RS04785 at 1005.792 kb on + strand, within AZOBR_RS04785 at 1005.792 kb on + strand, within AZOBR_RS04785 at 1005.792 kb on + strand, within AZOBR_RS04785 at 1005.792 kb on + strand, within AZOBR_RS04785 at 1005.793 kb on - strand, within AZOBR_RS04785 at 1006.032 kb on - strand, within AZOBR_RS04785 at 1006.641 kb on + strand, within AZOBR_RS04785 at 1006.641 kb on + strand, within AZOBR_RS04785 at 1006.641 kb on + strand, within AZOBR_RS04785 at 1006.641 kb on + strand, within AZOBR_RS04785 at 1006.641 kb on + strand, within AZOBR_RS04785 at 1006.642 kb on - strand, within AZOBR_RS04785 at 1006.645 kb on + strand, within AZOBR_RS04785 at 1006.755 kb on + strand, within AZOBR_RS04785 at 1006.756 kb on - strand, within AZOBR_RS04785 at 1006.839 kb on + strand, within AZOBR_RS04785 at 1007.243 kb on + strand at 1007.243 kb on + strand at 1007.243 kb on + strand at 1007.243 kb on + strand at 1007.875 kb on + strand, within AZOBR_RS04790 at 1007.875 kb on + strand, within AZOBR_RS04790
Per-strain Table
Position Strand Gene LocusTag Fraction 6-Pentyl-2H-pyran-2-one 0.7162051667 mM remove 1,004,188 - +1.0 1,004,318 + +0.6 1,004,318 + -0.0 1,004,319 - -0.0 1,004,319 - +0.3 1,004,780 + -0.3 1,004,780 + +0.8 1,004,780 + -0.0 1,004,780 + +1.0 1,004,781 - -0.2 1,004,790 + -0.8 1,004,791 - +0.4 1,004,791 - +0.7 1,004,873 + -1.6 1,004,873 + -0.0 1,005,111 + -0.2 1,005,315 + -0.4 1,005,315 + +0.2 1,005,315 + +1.6 1,005,315 + +0.5 1,005,315 + +3.6 1,005,315 + -0.0 1,005,316 - +1.0 1,005,316 - +3.6 1,005,316 - -0.5 1,005,402 + AZOBR_RS04785 0.12 -0.8 1,005,427 - AZOBR_RS04785 0.13 +2.0 1,005,427 - AZOBR_RS04785 0.13 -0.3 1,005,516 + AZOBR_RS04785 0.18 -0.3 1,005,517 - AZOBR_RS04785 0.18 +0.6 1,005,735 + AZOBR_RS04785 0.29 -0.2 1,005,735 + AZOBR_RS04785 0.29 +1.5 1,005,736 - AZOBR_RS04785 0.29 -0.6 1,005,736 - AZOBR_RS04785 0.29 -1.1 1,005,736 - AZOBR_RS04785 0.29 -0.5 1,005,736 - AZOBR_RS04785 0.29 -0.1 1,005,792 + AZOBR_RS04785 0.32 -0.0 1,005,792 + AZOBR_RS04785 0.32 -0.8 1,005,792 + AZOBR_RS04785 0.32 -1.4 1,005,792 + AZOBR_RS04785 0.32 -1.0 1,005,793 - AZOBR_RS04785 0.32 +0.4 1,006,032 - AZOBR_RS04785 0.44 +0.7 1,006,641 + AZOBR_RS04785 0.76 -0.5 1,006,641 + AZOBR_RS04785 0.76 -0.5 1,006,641 + AZOBR_RS04785 0.76 +0.0 1,006,641 + AZOBR_RS04785 0.76 -0.2 1,006,641 + AZOBR_RS04785 0.76 +0.4 1,006,642 - AZOBR_RS04785 0.76 +0.4 1,006,645 + AZOBR_RS04785 0.76 +0.1 1,006,755 + AZOBR_RS04785 0.82 -0.4 1,006,756 - AZOBR_RS04785 0.82 -0.9 1,006,839 + AZOBR_RS04785 0.86 -0.1 1,007,243 + -0.7 1,007,243 + -0.4 1,007,243 + -0.9 1,007,243 + +2.0 1,007,875 + AZOBR_RS04790 0.56 -0.2 1,007,875 + AZOBR_RS04790 0.56 -0.4
Or see this region's nucleotide sequence