Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17695 and AZOBR_RS17700 are separated by 18 nucleotides AZOBR_RS17700 and AZOBR_RS17705 are separated by 848 nucleotides
AZOBR_RS17695: AZOBR_RS17695 - hypothetical protein, at 730,118 to 731,863
_RS17695
AZOBR_RS17700: AZOBR_RS17700 - putative N-acetylmuramoyl-L-alanine amidase, at 731,882 to 734,587
_RS17700
AZOBR_RS17705: AZOBR_RS17705 - hypothetical protein, at 735,436 to 736,497
_RS17705
Position (kb) 731
732
733
734
735 Strain fitness (log2 ratio) -1
0
1
2
3 at 731.554 kb on - strand, within AZOBR_RS17695 at 731.554 kb on - strand, within AZOBR_RS17695 at 731.554 kb on - strand, within AZOBR_RS17695 at 731.661 kb on + strand, within AZOBR_RS17695 at 731.661 kb on + strand, within AZOBR_RS17695 at 731.662 kb on - strand, within AZOBR_RS17695 at 731.662 kb on - strand, within AZOBR_RS17695 at 731.662 kb on - strand, within AZOBR_RS17695 at 731.662 kb on - strand, within AZOBR_RS17695 at 731.662 kb on - strand, within AZOBR_RS17695 at 731.680 kb on - strand, within AZOBR_RS17695 at 731.752 kb on - strand at 731.769 kb on + strand at 731.770 kb on - strand at 731.770 kb on - strand at 731.770 kb on - strand at 731.770 kb on - strand at 731.770 kb on - strand at 731.770 kb on - strand at 731.770 kb on - strand at 731.833 kb on - strand at 731.845 kb on - strand at 732.022 kb on - strand at 732.022 kb on - strand at 732.072 kb on + strand at 732.072 kb on + strand at 732.135 kb on + strand at 732.136 kb on - strand at 732.280 kb on + strand, within AZOBR_RS17700 at 732.280 kb on + strand, within AZOBR_RS17700 at 732.280 kb on + strand, within AZOBR_RS17700 at 732.280 kb on + strand, within AZOBR_RS17700 at 732.280 kb on + strand, within AZOBR_RS17700 at 732.280 kb on + strand, within AZOBR_RS17700 at 732.281 kb on - strand, within AZOBR_RS17700 at 732.281 kb on - strand, within AZOBR_RS17700 at 732.281 kb on - strand, within AZOBR_RS17700 at 732.281 kb on - strand, within AZOBR_RS17700 at 732.369 kb on + strand, within AZOBR_RS17700 at 732.369 kb on + strand, within AZOBR_RS17700 at 732.369 kb on + strand, within AZOBR_RS17700 at 732.370 kb on - strand, within AZOBR_RS17700 at 732.370 kb on - strand, within AZOBR_RS17700 at 732.370 kb on - strand, within AZOBR_RS17700 at 732.370 kb on - strand, within AZOBR_RS17700 at 732.566 kb on + strand, within AZOBR_RS17700 at 732.816 kb on + strand, within AZOBR_RS17700 at 732.816 kb on + strand, within AZOBR_RS17700 at 732.816 kb on + strand, within AZOBR_RS17700 at 732.816 kb on + strand, within AZOBR_RS17700 at 732.817 kb on - strand, within AZOBR_RS17700 at 732.817 kb on - strand, within AZOBR_RS17700 at 732.907 kb on - strand, within AZOBR_RS17700 at 733.140 kb on + strand, within AZOBR_RS17700 at 733.141 kb on - strand, within AZOBR_RS17700 at 733.357 kb on + strand, within AZOBR_RS17700 at 733.664 kb on + strand, within AZOBR_RS17700 at 733.664 kb on + strand, within AZOBR_RS17700 at 733.665 kb on - strand, within AZOBR_RS17700 at 733.665 kb on - strand, within AZOBR_RS17700 at 733.665 kb on - strand, within AZOBR_RS17700 at 733.665 kb on - strand, within AZOBR_RS17700 at 733.665 kb on - strand, within AZOBR_RS17700 at 733.665 kb on - strand, within AZOBR_RS17700 at 734.011 kb on + strand, within AZOBR_RS17700 at 734.076 kb on + strand, within AZOBR_RS17700 at 734.076 kb on + strand, within AZOBR_RS17700 at 734.119 kb on + strand, within AZOBR_RS17700 at 734.119 kb on + strand, within AZOBR_RS17700 at 734.120 kb on - strand, within AZOBR_RS17700 at 734.120 kb on - strand, within AZOBR_RS17700 at 734.948 kb on + strand at 734.948 kb on + strand at 734.949 kb on - strand at 734.949 kb on - strand at 735.094 kb on + strand at 735.095 kb on - strand at 735.258 kb on + strand at 735.259 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 731,554 - AZOBR_RS17695 0.82 -0.2 731,554 - AZOBR_RS17695 0.82 +0.0 731,554 - AZOBR_RS17695 0.82 +1.0 731,661 + AZOBR_RS17695 0.88 +1.1 731,661 + AZOBR_RS17695 0.88 +0.3 731,662 - AZOBR_RS17695 0.88 +0.0 731,662 - AZOBR_RS17695 0.88 -0.1 731,662 - AZOBR_RS17695 0.88 +0.0 731,662 - AZOBR_RS17695 0.88 +0.4 731,662 - AZOBR_RS17695 0.88 +0.3 731,680 - AZOBR_RS17695 0.89 -0.2 731,752 - -0.9 731,769 + -0.0 731,770 - -0.9 731,770 - -0.2 731,770 - -0.8 731,770 - +0.7 731,770 - -0.5 731,770 - -0.3 731,770 - -0.0 731,833 - -0.7 731,845 - +0.8 732,022 - +0.7 732,022 - +0.1 732,072 + -0.2 732,072 + +0.8 732,135 + -1.1 732,136 - -0.7 732,280 + AZOBR_RS17700 0.15 -1.0 732,280 + AZOBR_RS17700 0.15 -0.9 732,280 + AZOBR_RS17700 0.15 -0.3 732,280 + AZOBR_RS17700 0.15 -0.9 732,280 + AZOBR_RS17700 0.15 -0.9 732,280 + AZOBR_RS17700 0.15 +1.1 732,281 - AZOBR_RS17700 0.15 +2.1 732,281 - AZOBR_RS17700 0.15 +0.9 732,281 - AZOBR_RS17700 0.15 -1.2 732,281 - AZOBR_RS17700 0.15 +0.8 732,369 + AZOBR_RS17700 0.18 +0.0 732,369 + AZOBR_RS17700 0.18 -0.1 732,369 + AZOBR_RS17700 0.18 +1.1 732,370 - AZOBR_RS17700 0.18 +0.4 732,370 - AZOBR_RS17700 0.18 +0.3 732,370 - AZOBR_RS17700 0.18 -1.0 732,370 - AZOBR_RS17700 0.18 +0.3 732,566 + AZOBR_RS17700 0.25 +0.4 732,816 + AZOBR_RS17700 0.35 -0.9 732,816 + AZOBR_RS17700 0.35 +0.5 732,816 + AZOBR_RS17700 0.35 +1.2 732,816 + AZOBR_RS17700 0.35 +0.9 732,817 - AZOBR_RS17700 0.35 +0.3 732,817 - AZOBR_RS17700 0.35 -0.5 732,907 - AZOBR_RS17700 0.38 -0.1 733,140 + AZOBR_RS17700 0.46 +0.3 733,141 - AZOBR_RS17700 0.47 -0.7 733,357 + AZOBR_RS17700 0.55 +1.0 733,664 + AZOBR_RS17700 0.66 +1.5 733,664 + AZOBR_RS17700 0.66 -0.5 733,665 - AZOBR_RS17700 0.66 -0.1 733,665 - AZOBR_RS17700 0.66 +0.0 733,665 - AZOBR_RS17700 0.66 +0.8 733,665 - AZOBR_RS17700 0.66 +0.5 733,665 - AZOBR_RS17700 0.66 +0.4 733,665 - AZOBR_RS17700 0.66 -0.2 734,011 + AZOBR_RS17700 0.79 -0.0 734,076 + AZOBR_RS17700 0.81 -0.1 734,076 + AZOBR_RS17700 0.81 +0.1 734,119 + AZOBR_RS17700 0.83 -0.4 734,119 + AZOBR_RS17700 0.83 -0.2 734,120 - AZOBR_RS17700 0.83 +0.3 734,120 - AZOBR_RS17700 0.83 -0.2 734,948 + +0.5 734,948 + +1.1 734,949 - +1.1 734,949 - +1.1 735,094 + +0.8 735,095 - +1.1 735,258 + -0.5 735,259 - +3.1
Or see this region's nucleotide sequence