Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS04720 and AZOBR_RS04725 overlap by 4 nucleotides AZOBR_RS04725 and AZOBR_RS04730 are separated by 53 nucleotides AZOBR_RS04730 and AZOBR_RS04735 are separated by 209 nucleotides AZOBR_RS04735 and AZOBR_RS04740 overlap by 20 nucleotides
AZOBR_RS04720: AZOBR_RS04720 - conserved exported protein of unknown function, at 994,712 to 995,329
_RS04720
AZOBR_RS04725: AZOBR_RS04725 - thioesterase, at 995,326 to 995,733
_RS04725
AZOBR_RS04730: AZOBR_RS04730 - hypothetical protein, at 995,787 to 997,193
_RS04730
AZOBR_RS04735: AZOBR_RS04735 - conserved membrane protein of unknown function, at 997,403 to 997,984
_RS04735
AZOBR_RS04740: AZOBR_RS04740 - acyl carrier protein, at 997,965 to 998,210
_RS04740
Position (kb) 995
996
997
998 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 995.008 kb on - strand, within AZOBR_RS04720 at 995.463 kb on - strand, within AZOBR_RS04725 at 995.543 kb on + strand, within AZOBR_RS04725 at 995.544 kb on - strand, within AZOBR_RS04725 at 995.649 kb on - strand, within AZOBR_RS04725 at 995.649 kb on - strand, within AZOBR_RS04725 at 995.657 kb on + strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.658 kb on - strand, within AZOBR_RS04725 at 995.696 kb on + strand at 995.697 kb on - strand at 995.697 kb on - strand at 995.697 kb on - strand at 995.697 kb on - strand at 996.089 kb on + strand, within AZOBR_RS04730 at 996.090 kb on - strand, within AZOBR_RS04730 at 996.090 kb on - strand, within AZOBR_RS04730 at 996.486 kb on - strand, within AZOBR_RS04730 at 996.898 kb on + strand, within AZOBR_RS04730 at 996.899 kb on - strand, within AZOBR_RS04730 at 997.479 kb on + strand, within AZOBR_RS04735 at 997.479 kb on + strand, within AZOBR_RS04735 at 997.480 kb on - strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.599 kb on + strand, within AZOBR_RS04735 at 997.600 kb on - strand, within AZOBR_RS04735 at 997.600 kb on - strand, within AZOBR_RS04735 at 997.723 kb on - strand, within AZOBR_RS04735 at 997.902 kb on + strand, within AZOBR_RS04735 at 997.966 kb on + strand at 997.966 kb on + strand at 997.966 kb on + strand at 997.966 kb on + strand at 997.966 kb on + strand at 997.967 kb on - strand at 997.967 kb on - strand at 998.191 kb on + strand at 998.192 kb on - strand at 998.192 kb on - strand at 998.192 kb on - strand at 998.192 kb on - strand at 998.192 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 995,008 - AZOBR_RS04720 0.48 +0.6 995,463 - AZOBR_RS04725 0.34 -0.4 995,543 + AZOBR_RS04725 0.53 -0.7 995,544 - AZOBR_RS04725 0.53 -0.7 995,649 - AZOBR_RS04725 0.79 +1.4 995,649 - AZOBR_RS04725 0.79 +0.6 995,657 + AZOBR_RS04725 0.81 -0.5 995,658 - AZOBR_RS04725 0.81 -0.7 995,658 - AZOBR_RS04725 0.81 +0.1 995,658 - AZOBR_RS04725 0.81 +0.1 995,658 - AZOBR_RS04725 0.81 +0.1 995,658 - AZOBR_RS04725 0.81 -0.4 995,696 + -0.9 995,697 - -1.9 995,697 - -1.7 995,697 - -0.5 995,697 - -0.7 996,089 + AZOBR_RS04730 0.21 -0.5 996,090 - AZOBR_RS04730 0.22 -0.4 996,090 - AZOBR_RS04730 0.22 -0.1 996,486 - AZOBR_RS04730 0.50 +0.1 996,898 + AZOBR_RS04730 0.79 -0.1 996,899 - AZOBR_RS04730 0.79 +0.3 997,479 + AZOBR_RS04735 0.13 -0.6 997,479 + AZOBR_RS04735 0.13 -1.4 997,480 - AZOBR_RS04735 0.13 -0.7 997,599 + AZOBR_RS04735 0.34 +1.6 997,599 + AZOBR_RS04735 0.34 -0.3 997,599 + AZOBR_RS04735 0.34 +0.4 997,599 + AZOBR_RS04735 0.34 -3.5 997,599 + AZOBR_RS04735 0.34 -0.2 997,600 - AZOBR_RS04735 0.34 -0.5 997,600 - AZOBR_RS04735 0.34 +0.4 997,723 - AZOBR_RS04735 0.55 +0.6 997,902 + AZOBR_RS04735 0.86 -0.7 997,966 + +2.1 997,966 + +0.1 997,966 + -0.4 997,966 + +0.6 997,966 + +0.2 997,967 - -0.4 997,967 - -0.1 998,191 + +0.6 998,192 - -0.1 998,192 - -0.3 998,192 - -0.4 998,192 - -0.2 998,192 - -0.2
Or see this region's nucleotide sequence