Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS26535 and AZOBR_RS26540 are separated by 26 nucleotides AZOBR_RS26540 and AZOBR_RS26545 are separated by 2 nucleotides AZOBR_RS26545 and AZOBR_RS26550 overlap by 4 nucleotides
AZOBR_RS26535: AZOBR_RS26535 - hypothetical protein, at 99,110 to 99,535
_RS26535
AZOBR_RS26540: AZOBR_RS26540 - hypothetical protein, at 99,562 to 99,945
_RS26540
AZOBR_RS26545: AZOBR_RS26545 - acyl dehydratase, at 99,948 to 100,349
_RS26545
AZOBR_RS26550: AZOBR_RS26550 - putative enoyl-CoA hydratase/isomerase, at 100,346 to 101,092
_RS26550
Position (kb) 99
100 Strain fitness (log2 ratio) -1
0
1
2 at 98.637 kb on + strand at 98.797 kb on + strand at 98.797 kb on + strand at 98.797 kb on + strand at 98.797 kb on + strand at 98.798 kb on - strand at 98.942 kb on - strand at 99.374 kb on + strand, within AZOBR_RS26535 at 99.374 kb on + strand, within AZOBR_RS26535 at 99.375 kb on - strand, within AZOBR_RS26535 at 99.375 kb on - strand, within AZOBR_RS26535 at 99.721 kb on + strand, within AZOBR_RS26540 at 99.722 kb on - strand, within AZOBR_RS26540 at 99.756 kb on + strand, within AZOBR_RS26540 at 100.024 kb on - strand, within AZOBR_RS26545 at 100.266 kb on + strand, within AZOBR_RS26545 at 100.267 kb on - strand, within AZOBR_RS26545 at 100.854 kb on - strand, within AZOBR_RS26550 at 100.925 kb on + strand at 100.926 kb on - strand, within AZOBR_RS26550 at 100.926 kb on - strand, within AZOBR_RS26550 at 100.926 kb on - strand, within AZOBR_RS26550 at 100.928 kb on + strand, within AZOBR_RS26550
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 98,637 + -0.2 98,797 + -0.6 98,797 + -0.1 98,797 + -0.1 98,797 + -0.0 98,798 - +0.8 98,942 - -0.7 99,374 + AZOBR_RS26535 0.62 -0.2 99,374 + AZOBR_RS26535 0.62 +0.3 99,375 - AZOBR_RS26535 0.62 +0.6 99,375 - AZOBR_RS26535 0.62 -0.1 99,721 + AZOBR_RS26540 0.41 +2.0 99,722 - AZOBR_RS26540 0.42 +1.0 99,756 + AZOBR_RS26540 0.51 +1.0 100,024 - AZOBR_RS26545 0.19 +0.4 100,266 + AZOBR_RS26545 0.79 -0.2 100,267 - AZOBR_RS26545 0.79 -0.2 100,854 - AZOBR_RS26550 0.68 -0.3 100,925 + -0.0 100,926 - AZOBR_RS26550 0.78 +1.4 100,926 - AZOBR_RS26550 0.78 +1.0 100,926 - AZOBR_RS26550 0.78 -0.8 100,928 + AZOBR_RS26550 0.78 -0.3
Or see this region's nucleotide sequence