Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS16385 and AZOBR_RS16390 are separated by 68 nucleotides AZOBR_RS16390 and AZOBR_RS16395 are separated by 201 nucleotides AZOBR_RS16395 and AZOBR_RS16400 are separated by 106 nucleotides
AZOBR_RS16385: AZOBR_RS16385 - aminopeptidase A, at 424,385 to 425,887
_RS16385
AZOBR_RS16390: AZOBR_RS16390 - DNA polymerase III subunit chi, at 425,956 to 426,405
_RS16390
AZOBR_RS16395: AZOBR_RS16395 - histidine kinase, at 426,607 to 427,809
_RS16395
AZOBR_RS16400: AZOBR_RS16400 - MFS transporter, at 427,916 to 429,232
_RS16400
Position (kb) 426
427
428 Strain fitness (log2 ratio) -1
0
1
2 at 425.870 kb on + strand at 425.885 kb on + strand at 425.885 kb on + strand at 425.885 kb on + strand at 425.885 kb on + strand at 426.448 kb on - strand at 426.466 kb on + strand at 426.466 kb on + strand at 426.466 kb on + strand at 426.466 kb on + strand at 426.467 kb on - strand at 426.467 kb on - strand at 426.467 kb on - strand at 426.727 kb on + strand at 426.866 kb on - strand, within AZOBR_RS16395 at 426.866 kb on - strand, within AZOBR_RS16395 at 426.866 kb on - strand, within AZOBR_RS16395 at 426.866 kb on - strand, within AZOBR_RS16395 at 426.877 kb on + strand, within AZOBR_RS16395 at 426.877 kb on + strand, within AZOBR_RS16395 at 426.878 kb on - strand, within AZOBR_RS16395 at 426.878 kb on - strand, within AZOBR_RS16395 at 426.878 kb on - strand, within AZOBR_RS16395 at 427.027 kb on + strand, within AZOBR_RS16395 at 427.028 kb on - strand, within AZOBR_RS16395 at 427.246 kb on + strand, within AZOBR_RS16395 at 427.246 kb on + strand, within AZOBR_RS16395 at 427.246 kb on + strand, within AZOBR_RS16395 at 427.247 kb on - strand, within AZOBR_RS16395 at 427.247 kb on - strand, within AZOBR_RS16395 at 427.255 kb on + strand, within AZOBR_RS16395 at 427.255 kb on + strand, within AZOBR_RS16395 at 427.255 kb on + strand, within AZOBR_RS16395 at 427.255 kb on + strand, within AZOBR_RS16395 at 427.255 kb on + strand, within AZOBR_RS16395 at 427.256 kb on - strand, within AZOBR_RS16395 at 427.256 kb on - strand, within AZOBR_RS16395 at 427.256 kb on - strand, within AZOBR_RS16395 at 427.852 kb on + strand at 427.853 kb on - strand at 428.038 kb on + strand at 428.148 kb on + strand, within AZOBR_RS16400 at 428.149 kb on - strand, within AZOBR_RS16400 at 428.149 kb on - strand, within AZOBR_RS16400 at 428.271 kb on + strand, within AZOBR_RS16400 at 428.272 kb on - strand, within AZOBR_RS16400 at 428.272 kb on - strand, within AZOBR_RS16400 at 428.272 kb on - strand, within AZOBR_RS16400
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 425,870 + -0.1 425,885 + -0.3 425,885 + +0.1 425,885 + -0.0 425,885 + +0.4 426,448 - +0.0 426,466 + +0.5 426,466 + +1.0 426,466 + -0.1 426,466 + +0.1 426,467 - -0.1 426,467 - +0.3 426,467 - +0.2 426,727 + +0.1 426,866 - AZOBR_RS16395 0.22 +0.2 426,866 - AZOBR_RS16395 0.22 -0.7 426,866 - AZOBR_RS16395 0.22 -0.1 426,866 - AZOBR_RS16395 0.22 +0.3 426,877 + AZOBR_RS16395 0.22 +0.7 426,877 + AZOBR_RS16395 0.22 +0.5 426,878 - AZOBR_RS16395 0.23 -0.4 426,878 - AZOBR_RS16395 0.23 +0.0 426,878 - AZOBR_RS16395 0.23 +1.9 427,027 + AZOBR_RS16395 0.35 -1.0 427,028 - AZOBR_RS16395 0.35 -0.1 427,246 + AZOBR_RS16395 0.53 +1.0 427,246 + AZOBR_RS16395 0.53 +0.1 427,246 + AZOBR_RS16395 0.53 +0.5 427,247 - AZOBR_RS16395 0.53 +0.2 427,247 - AZOBR_RS16395 0.53 +0.7 427,255 + AZOBR_RS16395 0.54 -0.1 427,255 + AZOBR_RS16395 0.54 -0.9 427,255 + AZOBR_RS16395 0.54 +0.5 427,255 + AZOBR_RS16395 0.54 -0.5 427,255 + AZOBR_RS16395 0.54 -0.1 427,256 - AZOBR_RS16395 0.54 +0.0 427,256 - AZOBR_RS16395 0.54 +0.5 427,256 - AZOBR_RS16395 0.54 +0.1 427,852 + +0.3 427,853 - +0.8 428,038 + +0.0 428,148 + AZOBR_RS16400 0.18 +0.2 428,149 - AZOBR_RS16400 0.18 +0.5 428,149 - AZOBR_RS16400 0.18 +0.1 428,271 + AZOBR_RS16400 0.27 +0.7 428,272 - AZOBR_RS16400 0.27 +1.1 428,272 - AZOBR_RS16400 0.27 -0.9 428,272 - AZOBR_RS16400 0.27 +0.8
Or see this region's nucleotide sequence