Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS13075 and AZOBR_RS13080 are separated by 309 nucleotides AZOBR_RS13080 and AZOBR_RS13085 overlap by 4 nucleotides
AZOBR_RS13075: AZOBR_RS13075 - sulfonate ABC transporter ATP-binding protein, at 2,759,844 to 2,760,596
_RS13075
AZOBR_RS13080: AZOBR_RS13080 - putative MFS superfamily multidrug transport protein, at 2,760,906 to 2,762,150
_RS13080
AZOBR_RS13085: AZOBR_RS13085 - putative sulfate ester transport system substrate-binding protein, at 2,762,147 to 2,763,202
_RS13085
Position (kb)
2760
2761
2762
2763 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2760.030 kb on + strand, within AZOBR_RS13075 at 2760.031 kb on - strand, within AZOBR_RS13075 at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.631 kb on + strand at 2760.632 kb on - strand at 2760.632 kb on - strand at 2760.632 kb on - strand at 2761.024 kb on - strand at 2761.260 kb on + strand, within AZOBR_RS13080 at 2761.260 kb on + strand, within AZOBR_RS13080 at 2761.261 kb on - strand, within AZOBR_RS13080 at 2761.261 kb on - strand, within AZOBR_RS13080 at 2761.404 kb on + strand, within AZOBR_RS13080 at 2761.404 kb on + strand, within AZOBR_RS13080 at 2761.405 kb on - strand, within AZOBR_RS13080 at 2761.405 kb on - strand, within AZOBR_RS13080 at 2761.566 kb on + strand, within AZOBR_RS13080 at 2761.567 kb on - strand, within AZOBR_RS13080 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.354 kb on + strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.355 kb on - strand, within AZOBR_RS13085 at 2762.420 kb on + strand, within AZOBR_RS13085 at 2762.420 kb on + strand, within AZOBR_RS13085 at 2762.785 kb on + strand, within AZOBR_RS13085 at 2762.972 kb on + strand, within AZOBR_RS13085 at 2762.973 kb on - strand, within AZOBR_RS13085 at 2763.116 kb on + strand at 2763.116 kb on + strand at 2763.116 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 2,760,030 + AZOBR_RS13075 0.25 +1.1 2,760,031 - AZOBR_RS13075 0.25 -0.1 2,760,631 + +0.2 2,760,631 + +0.3 2,760,631 + +1.3 2,760,631 + +1.9 2,760,631 + +0.3 2,760,631 + -0.3 2,760,632 - +0.2 2,760,632 - +0.0 2,760,632 - +0.3 2,761,024 - -0.6 2,761,260 + AZOBR_RS13080 0.28 +0.2 2,761,260 + AZOBR_RS13080 0.28 +1.2 2,761,261 - AZOBR_RS13080 0.29 -0.1 2,761,261 - AZOBR_RS13080 0.29 +1.4 2,761,404 + AZOBR_RS13080 0.40 -0.4 2,761,404 + AZOBR_RS13080 0.40 -0.0 2,761,405 - AZOBR_RS13080 0.40 +0.1 2,761,405 - AZOBR_RS13080 0.40 -0.2 2,761,566 + AZOBR_RS13080 0.53 +0.3 2,761,567 - AZOBR_RS13080 0.53 +1.9 2,762,354 + AZOBR_RS13085 0.20 -0.3 2,762,354 + AZOBR_RS13085 0.20 -2.4 2,762,354 + AZOBR_RS13085 0.20 -0.2 2,762,354 + AZOBR_RS13085 0.20 +0.2 2,762,355 - AZOBR_RS13085 0.20 -0.4 2,762,355 - AZOBR_RS13085 0.20 -0.6 2,762,355 - AZOBR_RS13085 0.20 -0.1 2,762,355 - AZOBR_RS13085 0.20 -0.5 2,762,420 + AZOBR_RS13085 0.26 +0.2 2,762,420 + AZOBR_RS13085 0.26 +1.9 2,762,785 + AZOBR_RS13085 0.60 -2.1 2,762,972 + AZOBR_RS13085 0.78 +0.8 2,762,973 - AZOBR_RS13085 0.78 -0.3 2,763,116 + +1.1 2,763,116 + -0.4 2,763,116 + +0.1
Or see this region's nucleotide sequence