Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08500 and AZOBR_RS08505 are separated by 39 nucleotides AZOBR_RS08505 and AZOBR_RS08510 are separated by 51 nucleotides AZOBR_RS08510 and AZOBR_RS08515 are separated by 365 nucleotides
AZOBR_RS08500: AZOBR_RS08500 - ABC transporter permease, at 1,782,860 to 1,783,843
_RS08500
AZOBR_RS08505: AZOBR_RS08505 - hypothetical protein, at 1,783,883 to 1,784,560
_RS08505
AZOBR_RS08510: AZOBR_RS08510 - alanine dehydrogenase, at 1,784,612 to 1,785,730
_RS08510
AZOBR_RS08515: AZOBR_RS08515 - hypothetical protein, at 1,786,096 to 1,786,662
_RS08515
Position (kb) 1784
1785
1786 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 1783.718 kb on + strand, within AZOBR_RS08500 at 1783.719 kb on - strand, within AZOBR_RS08500 at 1783.907 kb on + strand at 1783.907 kb on + strand at 1783.908 kb on - strand at 1784.060 kb on + strand, within AZOBR_RS08505 at 1784.061 kb on - strand, within AZOBR_RS08505 at 1784.189 kb on + strand, within AZOBR_RS08505 at 1784.189 kb on + strand, within AZOBR_RS08505 at 1784.189 kb on + strand, within AZOBR_RS08505 at 1784.190 kb on - strand, within AZOBR_RS08505 at 1784.190 kb on - strand, within AZOBR_RS08505 at 1784.379 kb on - strand at 1784.465 kb on + strand, within AZOBR_RS08505 at 1784.844 kb on + strand, within AZOBR_RS08510 at 1784.845 kb on - strand, within AZOBR_RS08510 at 1784.869 kb on - strand, within AZOBR_RS08510 at 1785.076 kb on - strand, within AZOBR_RS08510 at 1785.450 kb on + strand, within AZOBR_RS08510 at 1785.450 kb on + strand, within AZOBR_RS08510 at 1785.451 kb on - strand, within AZOBR_RS08510 at 1785.451 kb on - strand, within AZOBR_RS08510 at 1785.582 kb on + strand, within AZOBR_RS08510 at 1785.582 kb on + strand, within AZOBR_RS08510 at 1785.582 kb on + strand, within AZOBR_RS08510 at 1785.583 kb on - strand, within AZOBR_RS08510 at 1785.583 kb on - strand, within AZOBR_RS08510 at 1785.583 kb on - strand, within AZOBR_RS08510 at 1785.690 kb on + strand at 1785.796 kb on - strand at 1786.000 kb on + strand at 1786.504 kb on + strand, within AZOBR_RS08515
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 1,783,718 + AZOBR_RS08500 0.87 +0.1 1,783,719 - AZOBR_RS08500 0.87 -0.0 1,783,907 + -0.0 1,783,907 + -0.4 1,783,908 - -0.8 1,784,060 + AZOBR_RS08505 0.26 -2.8 1,784,061 - AZOBR_RS08505 0.26 +0.6 1,784,189 + AZOBR_RS08505 0.45 -1.1 1,784,189 + AZOBR_RS08505 0.45 -1.2 1,784,189 + AZOBR_RS08505 0.45 -0.3 1,784,190 - AZOBR_RS08505 0.45 -0.4 1,784,190 - AZOBR_RS08505 0.45 -0.4 1,784,379 - -1.2 1,784,465 + AZOBR_RS08505 0.86 -0.0 1,784,844 + AZOBR_RS08510 0.21 +0.3 1,784,845 - AZOBR_RS08510 0.21 +0.1 1,784,869 - AZOBR_RS08510 0.23 -0.6 1,785,076 - AZOBR_RS08510 0.41 -0.1 1,785,450 + AZOBR_RS08510 0.75 -0.3 1,785,450 + AZOBR_RS08510 0.75 -0.2 1,785,451 - AZOBR_RS08510 0.75 -0.5 1,785,451 - AZOBR_RS08510 0.75 -0.1 1,785,582 + AZOBR_RS08510 0.87 -0.1 1,785,582 + AZOBR_RS08510 0.87 -0.9 1,785,582 + AZOBR_RS08510 0.87 -0.2 1,785,583 - AZOBR_RS08510 0.87 +0.1 1,785,583 - AZOBR_RS08510 0.87 -0.1 1,785,583 - AZOBR_RS08510 0.87 +0.6 1,785,690 + -0.5 1,785,796 - +0.5 1,786,000 + -0.7 1,786,504 + AZOBR_RS08515 0.72 +0.2
Or see this region's nucleotide sequence