Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS22840 and AZOBR_RS22845 are separated by 128 nucleotides AZOBR_RS22845 and AZOBR_RS22850 are separated by 178 nucleotides AZOBR_RS22850 and AZOBR_RS22855 are separated by 29 nucleotides AZOBR_RS22855 and AZOBR_RS22860 are separated by 125 nucleotides
AZOBR_RS22840: AZOBR_RS22840 - hypothetical protein, at 135,735 to 136,640
_RS22840
AZOBR_RS22845: AZOBR_RS22845 - methyltransferase, at 136,769 to 137,383
_RS22845
AZOBR_RS22850: AZOBR_RS22850 - hypothetical protein, at 137,562 to 137,891
_RS22850
AZOBR_RS22855: AZOBR_RS22855 - hypothetical protein, at 137,921 to 138,250
_RS22855
AZOBR_RS22860: AZOBR_RS22860 - metallo-beta-lactamase, at 138,376 to 139,887
_RS22860
Position (kb) 136
137
138 Strain fitness (log2 ratio) -1
0
1
2 at 136.158 kb on + strand, within AZOBR_RS22840 at 136.158 kb on + strand, within AZOBR_RS22840 at 136.159 kb on - strand, within AZOBR_RS22840 at 136.159 kb on - strand, within AZOBR_RS22840 at 136.159 kb on - strand, within AZOBR_RS22840 at 136.159 kb on - strand, within AZOBR_RS22840 at 136.284 kb on + strand, within AZOBR_RS22840 at 136.326 kb on + strand, within AZOBR_RS22840 at 136.327 kb on - strand, within AZOBR_RS22840 at 136.327 kb on - strand, within AZOBR_RS22840 at 136.473 kb on + strand, within AZOBR_RS22840 at 136.473 kb on + strand, within AZOBR_RS22840 at 136.474 kb on - strand, within AZOBR_RS22840 at 136.474 kb on - strand, within AZOBR_RS22840 at 136.545 kb on + strand, within AZOBR_RS22840 at 136.603 kb on - strand at 136.864 kb on - strand, within AZOBR_RS22845 at 136.956 kb on + strand, within AZOBR_RS22845 at 136.956 kb on + strand, within AZOBR_RS22845 at 136.957 kb on - strand, within AZOBR_RS22845 at 137.000 kb on + strand, within AZOBR_RS22845 at 137.338 kb on - strand at 137.358 kb on + strand at 137.359 kb on - strand at 137.483 kb on + strand at 137.484 kb on - strand at 137.484 kb on - strand at 137.749 kb on - strand, within AZOBR_RS22850 at 137.749 kb on - strand, within AZOBR_RS22850 at 138.039 kb on + strand, within AZOBR_RS22855 at 138.039 kb on + strand, within AZOBR_RS22855 at 138.039 kb on + strand, within AZOBR_RS22855 at 138.039 kb on + strand, within AZOBR_RS22855 at 138.039 kb on + strand, within AZOBR_RS22855 at 138.040 kb on - strand, within AZOBR_RS22855 at 138.040 kb on - strand, within AZOBR_RS22855 at 138.040 kb on - strand, within AZOBR_RS22855 at 138.040 kb on - strand, within AZOBR_RS22855 at 138.040 kb on - strand, within AZOBR_RS22855 at 138.040 kb on - strand, within AZOBR_RS22855
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 136,158 + AZOBR_RS22840 0.47 -0.3 136,158 + AZOBR_RS22840 0.47 -1.4 136,159 - AZOBR_RS22840 0.47 +0.3 136,159 - AZOBR_RS22840 0.47 -0.5 136,159 - AZOBR_RS22840 0.47 +0.3 136,159 - AZOBR_RS22840 0.47 -0.2 136,284 + AZOBR_RS22840 0.61 -1.0 136,326 + AZOBR_RS22840 0.65 +2.0 136,327 - AZOBR_RS22840 0.65 +0.0 136,327 - AZOBR_RS22840 0.65 +0.4 136,473 + AZOBR_RS22840 0.81 +0.5 136,473 + AZOBR_RS22840 0.81 -0.3 136,474 - AZOBR_RS22840 0.82 +0.6 136,474 - AZOBR_RS22840 0.82 +0.6 136,545 + AZOBR_RS22840 0.89 -1.6 136,603 - +0.4 136,864 - AZOBR_RS22845 0.15 -0.5 136,956 + AZOBR_RS22845 0.30 -0.0 136,956 + AZOBR_RS22845 0.30 -0.2 136,957 - AZOBR_RS22845 0.31 +0.5 137,000 + AZOBR_RS22845 0.38 +0.0 137,338 - -0.1 137,358 + -0.6 137,359 - -0.1 137,483 + +0.1 137,484 - -1.1 137,484 - -1.5 137,749 - AZOBR_RS22850 0.57 -0.3 137,749 - AZOBR_RS22850 0.57 -0.1 138,039 + AZOBR_RS22855 0.36 -0.1 138,039 + AZOBR_RS22855 0.36 -0.5 138,039 + AZOBR_RS22855 0.36 +0.2 138,039 + AZOBR_RS22855 0.36 +0.4 138,039 + AZOBR_RS22855 0.36 +0.8 138,040 - AZOBR_RS22855 0.36 +0.3 138,040 - AZOBR_RS22855 0.36 +0.2 138,040 - AZOBR_RS22855 0.36 +0.4 138,040 - AZOBR_RS22855 0.36 +0.0 138,040 - AZOBR_RS22855 0.36 -0.1 138,040 - AZOBR_RS22855 0.36 +0.1
Or see this region's nucleotide sequence