Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17160 and AZOBR_RS17165 are separated by 16 nucleotides AZOBR_RS17165 and AZOBR_RS17170 are separated by 270 nucleotides AZOBR_RS17170 and AZOBR_RS17175 are separated by 162 nucleotides AZOBR_RS17175 and AZOBR_RS17180 are separated by 53 nucleotides AZOBR_RS17180 and AZOBR_RS17185 are separated by 92 nucleotides
AZOBR_RS17160: AZOBR_RS17160 - hypothetical protein, at 602,140 to 604,005
_RS17160
AZOBR_RS17165: AZOBR_RS17165 - hypothetical protein, at 604,022 to 604,291
_RS17165
AZOBR_RS17170: AZOBR_RS17170 - hypothetical protein, at 604,562 to 604,756
_RS17170
AZOBR_RS17175: AZOBR_RS17175 - hypothetical protein, at 604,919 to 606,181
_RS17175
AZOBR_RS17180: AZOBR_RS17180 - tfuA protein, at 606,235 to 606,966
_RS17180
AZOBR_RS17185: AZOBR_RS17185 - Crp/Fnr family transcriptional regulator, at 607,059 to 607,769
_RS17185
Position (kb) 604
605
606
607 Strain fitness (log2 ratio) -1
0
1
2 at 604.013 kb on + strand at 604.013 kb on + strand at 604.014 kb on - strand at 604.077 kb on + strand, within AZOBR_RS17165 at 604.077 kb on + strand, within AZOBR_RS17165 at 604.078 kb on - strand, within AZOBR_RS17165 at 604.078 kb on - strand, within AZOBR_RS17165 at 604.335 kb on - strand at 604.406 kb on + strand at 604.407 kb on - strand at 604.513 kb on + strand at 604.513 kb on + strand at 604.514 kb on - strand at 605.252 kb on + strand, within AZOBR_RS17175 at 605.252 kb on + strand, within AZOBR_RS17175 at 605.262 kb on - strand, within AZOBR_RS17175 at 605.882 kb on + strand, within AZOBR_RS17175 at 605.882 kb on + strand, within AZOBR_RS17175 at 605.883 kb on - strand, within AZOBR_RS17175 at 606.141 kb on - strand at 606.204 kb on + strand at 606.205 kb on - strand at 606.205 kb on - strand at 606.205 kb on - strand at 606.256 kb on + strand at 606.316 kb on + strand, within AZOBR_RS17180 at 606.317 kb on - strand, within AZOBR_RS17180 at 606.317 kb on - strand, within AZOBR_RS17180 at 606.317 kb on - strand, within AZOBR_RS17180
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 604,013 + -0.2 604,013 + -0.1 604,014 - -0.4 604,077 + AZOBR_RS17165 0.20 +1.0 604,077 + AZOBR_RS17165 0.20 +2.0 604,078 - AZOBR_RS17165 0.21 +1.4 604,078 - AZOBR_RS17165 0.21 -0.4 604,335 - -0.2 604,406 + +2.0 604,407 - -0.0 604,513 + -0.0 604,513 + -0.7 604,514 - +0.0 605,252 + AZOBR_RS17175 0.26 -0.3 605,252 + AZOBR_RS17175 0.26 -0.8 605,262 - AZOBR_RS17175 0.27 -1.4 605,882 + AZOBR_RS17175 0.76 -0.1 605,882 + AZOBR_RS17175 0.76 -0.1 605,883 - AZOBR_RS17175 0.76 -0.1 606,141 - +0.1 606,204 + -0.1 606,205 - -0.5 606,205 - -0.1 606,205 - -0.1 606,256 + +0.4 606,316 + AZOBR_RS17180 0.11 -0.3 606,317 - AZOBR_RS17180 0.11 +0.5 606,317 - AZOBR_RS17180 0.11 +0.5 606,317 - AZOBR_RS17180 0.11 +1.0
Or see this region's nucleotide sequence