Experiment: LB no stress control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS23950 and AZOBR_RS23955 are separated by 411 nucleotides AZOBR_RS23955 and AZOBR_RS23960 are separated by 10 nucleotides
AZOBR_RS23950: AZOBR_RS23950 - hypothetical protein, at 403,663 to 404,316
_RS23950
AZOBR_RS23955: AZOBR_RS23955 - potassium transporter TrkH, at 404,728 to 404,817
_RS23955
AZOBR_RS23960: AZOBR_RS23960 - ATPase, at 404,828 to 406,537
_RS23960
Position (kb) 403
404
405 Strain fitness (log2 ratio) -2
-1
0
1 at 402.922 kb on + strand at 402.923 kb on - strand at 402.923 kb on - strand at 403.817 kb on - strand, within AZOBR_RS23950 at 403.817 kb on - strand, within AZOBR_RS23950 at 403.817 kb on - strand, within AZOBR_RS23950 at 403.817 kb on - strand, within AZOBR_RS23950 at 403.834 kb on + strand, within AZOBR_RS23950 at 403.876 kb on + strand, within AZOBR_RS23950 at 403.876 kb on + strand, within AZOBR_RS23950 at 403.876 kb on + strand, within AZOBR_RS23950 at 403.877 kb on - strand, within AZOBR_RS23950 at 403.877 kb on - strand, within AZOBR_RS23950 at 403.877 kb on - strand, within AZOBR_RS23950 at 404.134 kb on + strand, within AZOBR_RS23950 at 404.134 kb on + strand, within AZOBR_RS23950 at 404.135 kb on - strand, within AZOBR_RS23950 at 404.464 kb on + strand at 404.464 kb on + strand at 404.465 kb on - strand at 404.469 kb on + strand at 404.470 kb on - strand at 404.482 kb on + strand at 404.482 kb on + strand at 404.493 kb on + strand at 404.493 kb on + strand at 404.493 kb on + strand at 404.494 kb on - strand at 404.496 kb on - strand at 404.527 kb on + strand at 404.529 kb on + strand at 404.529 kb on + strand at 404.530 kb on - strand at 404.688 kb on + strand at 404.688 kb on + strand at 404.688 kb on + strand at 404.688 kb on + strand at 404.689 kb on - strand at 404.740 kb on + strand, within AZOBR_RS23955 at 404.740 kb on + strand, within AZOBR_RS23955 at 404.903 kb on + strand at 404.904 kb on - strand at 404.904 kb on - strand at 404.905 kb on + strand at 404.905 kb on + strand at 404.905 kb on + strand at 404.905 kb on + strand at 404.906 kb on - strand at 404.906 kb on - strand at 404.906 kb on - strand at 404.975 kb on + strand at 405.023 kb on + strand, within AZOBR_RS23960 at 405.024 kb on - strand, within AZOBR_RS23960 at 405.024 kb on - strand, within AZOBR_RS23960 at 405.071 kb on + strand, within AZOBR_RS23960 at 405.071 kb on + strand, within AZOBR_RS23960 at 405.071 kb on + strand, within AZOBR_RS23960
Per-strain Table
Position Strand Gene LocusTag Fraction LB no stress control remove 402,922 + +1.2 402,923 - -0.1 402,923 - +1.2 403,817 - AZOBR_RS23950 0.24 -1.0 403,817 - AZOBR_RS23950 0.24 -0.1 403,817 - AZOBR_RS23950 0.24 -0.9 403,817 - AZOBR_RS23950 0.24 +0.3 403,834 + AZOBR_RS23950 0.26 -0.1 403,876 + AZOBR_RS23950 0.33 +0.0 403,876 + AZOBR_RS23950 0.33 -1.5 403,876 + AZOBR_RS23950 0.33 -0.1 403,877 - AZOBR_RS23950 0.33 +0.4 403,877 - AZOBR_RS23950 0.33 +0.5 403,877 - AZOBR_RS23950 0.33 +0.2 404,134 + AZOBR_RS23950 0.72 +0.5 404,134 + AZOBR_RS23950 0.72 -0.1 404,135 - AZOBR_RS23950 0.72 -0.6 404,464 + -0.1 404,464 + +0.5 404,465 - -0.5 404,469 + -0.1 404,470 - -0.3 404,482 + -0.2 404,482 + -0.6 404,493 + -0.8 404,493 + -0.8 404,493 + -0.9 404,494 - -0.2 404,496 - -0.1 404,527 + +0.1 404,529 + -0.5 404,529 + +0.1 404,530 - +0.5 404,688 + -0.4 404,688 + -0.1 404,688 + -0.2 404,688 + -0.0 404,689 - -0.2 404,740 + AZOBR_RS23955 0.13 -0.1 404,740 + AZOBR_RS23955 0.13 -0.2 404,903 + -1.6 404,904 - -0.3 404,904 - -0.7 404,905 + +0.8 404,905 + -0.6 404,905 + +0.8 404,905 + -2.5 404,906 - +0.2 404,906 - +0.8 404,906 - +0.6 404,975 + +0.6 405,023 + AZOBR_RS23960 0.11 +0.9 405,024 - AZOBR_RS23960 0.11 -0.1 405,024 - AZOBR_RS23960 0.11 +0.5 405,071 + AZOBR_RS23960 0.14 -0.6 405,071 + AZOBR_RS23960 0.14 -0.4 405,071 + AZOBR_RS23960 0.14 -0.6
Or see this region's nucleotide sequence