Strain Fitness in Methanococcus maripaludis S2 around MMP_RS04925

Experiment: McCas_H2_complete Chlorate 250 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMMP_RS04920 and MMP_RS04925 are separated by 12 nucleotidesMMP_RS04925 and MMP_RS04930 are separated by 10 nucleotides MMP_RS04920: MMP_RS04920 - CCA tRNA nucleotidyltransferase, at 936,440 to 937,774 _RS04920 MMP_RS04925: MMP_RS04925 - DUF530 family protein, at 937,787 to 939,217 _RS04925 MMP_RS04930: MMP_RS04930 - adenosylcobinamide-phosphate synthase CbiB, at 939,228 to 940,148 _RS04930 Position (kb) 937 938 939 940Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 937.116 kb on + strandat 937.209 kb on - strandat 937.311 kb on - strandat 937.370 kb on + strandat 937.383 kb on - strandat 937.423 kb on - strandat 937.556 kb on - strandat 937.557 kb on + strandat 937.662 kb on - strandat 937.666 kb on + strandat 937.702 kb on - strandat 937.702 kb on - strandat 937.703 kb on + strandat 937.704 kb on - strandat 937.715 kb on + strandat 937.718 kb on - strandat 937.723 kb on + strandat 937.749 kb on - strandat 937.753 kb on - strandat 937.885 kb on - strandat 937.980 kb on + strandat 937.983 kb on - strandat 937.984 kb on + strandat 938.106 kb on - strandat 938.193 kb on + strandat 938.484 kb on - strandat 938.485 kb on + strandat 938.485 kb on + strandat 938.561 kb on + strandat 938.561 kb on + strandat 938.631 kb on - strandat 938.632 kb on + strandat 938.701 kb on - strandat 938.768 kb on + strandat 938.809 kb on + strandat 938.816 kb on - strandat 938.817 kb on + strandat 938.819 kb on - strandat 938.913 kb on - strandat 939.018 kb on + strandat 939.026 kb on - strandat 939.026 kb on - strandat 939.042 kb on - strandat 939.123 kb on - strandat 939.130 kb on - strandat 939.139 kb on - strandat 939.164 kb on + strandat 939.311 kb on + strandat 939.406 kb on - strandat 939.413 kb on + strandat 939.461 kb on + strandat 939.579 kb on + strandat 939.692 kb on - strandat 939.721 kb on + strandat 939.814 kb on + strandat 939.846 kb on + strandat 939.892 kb on - strandat 940.128 kb on - strandat 940.129 kb on + strandat 940.131 kb on + strandat 940.135 kb on - strandat 940.146 kb on - strandat 940.147 kb on + strandat 940.185 kb on + strandat 940.214 kb on + strandat 940.214 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction McCas_H2_complete Chlorate 250 mM
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937,116 + -3.1
937,209 - -0.3
937,311 - -0.4
937,370 + +0.0
937,383 - +0.8
937,423 - -0.4
937,556 - -1.6
937,557 + +0.4
937,662 - -0.4
937,666 + -0.2
937,702 - -1.1
937,702 - -1.7
937,703 + -1.6
937,704 - -1.9
937,715 + +0.7
937,718 - -2.1
937,723 + -1.2
937,749 - -0.6
937,753 - -1.9
937,885 - -2.0
937,980 + +0.5
937,983 - -3.1
937,984 + -1.1
938,106 - -0.8
938,193 + +1.2
938,484 - -0.8
938,485 + -0.2
938,485 + -0.3
938,561 + -1.9
938,561 + -0.5
938,631 - -1.3
938,632 + +0.2
938,701 - -3.0
938,768 + -0.8
938,809 + -0.6
938,816 - +1.0
938,817 + -2.1
938,819 - -2.4
938,913 - -1.4
939,018 + -2.5
939,026 - -2.8
939,026 - +0.5
939,042 - -1.5
939,123 - +0.4
939,130 - -1.6
939,139 - -0.1
939,164 + -3.1
939,311 + -3.6
939,406 - +0.0
939,413 + -1.3
939,461 + -3.0
939,579 + -1.4
939,692 - -0.2
939,721 + -1.2
939,814 + -1.7
939,846 + -0.8
939,892 - -2.2
940,128 - -0.9
940,129 + -0.5
940,131 + -1.2
940,135 - -0.6
940,146 - +0.5
940,147 + -2.8
940,185 + +1.3
940,214 + +0.5
940,214 + +5.0

Or see this region's nucleotide sequence