Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS29125 and AZOBR_RS29130 are separated by 586 nucleotides AZOBR_RS29130 and AZOBR_RS29140 are separated by 635 nucleotides AZOBR_RS29140 and AZOBR_RS29145 are separated by 68 nucleotides
AZOBR_RS29125: AZOBR_RS29125 - hypothetical protein, at 657,962 to 658,516
_RS29125
AZOBR_RS29130: AZOBR_RS29130 - multidrug ABC transporter ATPase, at 659,103 to 660,911
_RS29130
AZOBR_RS29140: AZOBR_RS29140 - hypothetical protein; putative signal peptide, at 661,547 to 661,732
_RS29140
AZOBR_RS29145: AZOBR_RS29145 - peptidase, at 661,801 to 662,877
_RS29145
Position (kb) 659
660
661 Strain fitness (log2 ratio) -2
-1
0
1 at 658.110 kb on + strand, within AZOBR_RS29125 at 658.110 kb on + strand, within AZOBR_RS29125 at 658.171 kb on + strand, within AZOBR_RS29125 at 658.171 kb on + strand, within AZOBR_RS29125 at 658.172 kb on - strand, within AZOBR_RS29125 at 658.172 kb on - strand, within AZOBR_RS29125 at 658.172 kb on - strand, within AZOBR_RS29125 at 658.810 kb on + strand at 658.813 kb on - strand at 658.898 kb on - strand at 658.937 kb on + strand at 658.974 kb on + strand at 658.975 kb on - strand at 658.997 kb on - strand at 659.040 kb on + strand at 659.159 kb on + strand at 659.159 kb on + strand at 659.661 kb on + strand, within AZOBR_RS29130 at 659.661 kb on + strand, within AZOBR_RS29130 at 659.661 kb on + strand, within AZOBR_RS29130 at 659.661 kb on + strand, within AZOBR_RS29130 at 659.662 kb on - strand, within AZOBR_RS29130 at 659.695 kb on - strand, within AZOBR_RS29130 at 659.695 kb on - strand, within AZOBR_RS29130 at 659.988 kb on + strand, within AZOBR_RS29130 at 659.988 kb on + strand, within AZOBR_RS29130 at 659.988 kb on + strand, within AZOBR_RS29130 at 659.988 kb on + strand, within AZOBR_RS29130 at 659.989 kb on - strand, within AZOBR_RS29130 at 660.004 kb on - strand, within AZOBR_RS29130 at 660.004 kb on - strand, within AZOBR_RS29130 at 660.022 kb on - strand, within AZOBR_RS29130 at 660.214 kb on - strand, within AZOBR_RS29130 at 660.214 kb on - strand, within AZOBR_RS29130 at 660.315 kb on + strand, within AZOBR_RS29130 at 660.315 kb on + strand, within AZOBR_RS29130 at 660.315 kb on + strand, within AZOBR_RS29130 at 660.315 kb on + strand, within AZOBR_RS29130 at 660.316 kb on - strand, within AZOBR_RS29130 at 660.316 kb on - strand, within AZOBR_RS29130 at 660.316 kb on - strand, within AZOBR_RS29130 at 660.453 kb on + strand, within AZOBR_RS29130 at 661.030 kb on + strand at 661.030 kb on + strand at 661.030 kb on + strand at 661.030 kb on + strand at 661.031 kb on - strand at 661.031 kb on - strand at 661.031 kb on - strand at 661.067 kb on - strand at 661.227 kb on + strand at 661.228 kb on - strand at 661.534 kb on + strand at 661.534 kb on + strand at 661.534 kb on + strand at 661.535 kb on - strand at 661.546 kb on - strand at 661.556 kb on - strand at 661.759 kb on + strand at 661.760 kb on - strand at 661.772 kb on - strand at 661.818 kb on - strand at 661.892 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 658,110 + AZOBR_RS29125 0.27 -0.6 658,110 + AZOBR_RS29125 0.27 -0.9 658,171 + AZOBR_RS29125 0.38 +0.8 658,171 + AZOBR_RS29125 0.38 -0.3 658,172 - AZOBR_RS29125 0.38 +0.8 658,172 - AZOBR_RS29125 0.38 +0.1 658,172 - AZOBR_RS29125 0.38 +0.4 658,810 + -0.6 658,813 - +0.3 658,898 - +0.5 658,937 + +0.7 658,974 + -0.2 658,975 - -0.9 658,997 - +1.1 659,040 + -0.3 659,159 + -0.6 659,159 + -0.0 659,661 + AZOBR_RS29130 0.31 -0.1 659,661 + AZOBR_RS29130 0.31 +0.0 659,661 + AZOBR_RS29130 0.31 +0.5 659,661 + AZOBR_RS29130 0.31 -0.0 659,662 - AZOBR_RS29130 0.31 +1.1 659,695 - AZOBR_RS29130 0.33 +0.5 659,695 - AZOBR_RS29130 0.33 -0.7 659,988 + AZOBR_RS29130 0.49 -0.3 659,988 + AZOBR_RS29130 0.49 -1.4 659,988 + AZOBR_RS29130 0.49 -0.4 659,988 + AZOBR_RS29130 0.49 +0.2 659,989 - AZOBR_RS29130 0.49 -0.2 660,004 - AZOBR_RS29130 0.50 +0.9 660,004 - AZOBR_RS29130 0.50 -0.5 660,022 - AZOBR_RS29130 0.51 +0.4 660,214 - AZOBR_RS29130 0.61 -1.7 660,214 - AZOBR_RS29130 0.61 +0.1 660,315 + AZOBR_RS29130 0.67 -1.1 660,315 + AZOBR_RS29130 0.67 +0.2 660,315 + AZOBR_RS29130 0.67 -0.1 660,315 + AZOBR_RS29130 0.67 +0.4 660,316 - AZOBR_RS29130 0.67 +0.3 660,316 - AZOBR_RS29130 0.67 -0.2 660,316 - AZOBR_RS29130 0.67 +0.8 660,453 + AZOBR_RS29130 0.75 -0.3 661,030 + -0.3 661,030 + -0.2 661,030 + +1.2 661,030 + +0.3 661,031 - +0.5 661,031 - +0.9 661,031 - +1.6 661,067 - +0.7 661,227 + +0.5 661,228 - +0.6 661,534 + -1.2 661,534 + +0.7 661,534 + -2.0 661,535 - +0.8 661,546 - -0.0 661,556 - -0.3 661,759 + +1.4 661,760 - -1.1 661,772 - -1.0 661,818 - +0.3 661,892 + -0.4
Or see this region's nucleotide sequence