Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17950 and AZOBR_RS17955 are separated by 4 nucleotides AZOBR_RS17955 and AZOBR_RS17960 overlap by 13 nucleotides AZOBR_RS17960 and AZOBR_RS17965 are separated by 169 nucleotides
AZOBR_RS17950: AZOBR_RS17950 - iron ABC transporter, at 784,499 to 786,475
_RS17950
AZOBR_RS17955: AZOBR_RS17955 - amino acid ABC transporter substrate-binding protein, at 786,480 to 787,385
_RS17955
AZOBR_RS17960: AZOBR_RS17960 - iron-hydroxamate transporter ATP-binding protein, at 787,373 to 788,164
_RS17960
AZOBR_RS17965: AZOBR_RS17965 - ferrichrome receptor, at 788,334 to 790,487
_RS17965
Position (kb) 787
788
789 Strain fitness (log2 ratio) -1
0
1
2 at 786.739 kb on + strand, within AZOBR_RS17955 at 786.994 kb on + strand, within AZOBR_RS17955 at 786.994 kb on + strand, within AZOBR_RS17955 at 786.995 kb on - strand, within AZOBR_RS17955 at 787.015 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.072 kb on + strand, within AZOBR_RS17955 at 787.073 kb on - strand, within AZOBR_RS17955 at 787.073 kb on - strand, within AZOBR_RS17955 at 787.073 kb on - strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.075 kb on + strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.076 kb on - strand, within AZOBR_RS17955 at 787.124 kb on - strand, within AZOBR_RS17955 at 787.124 kb on - strand, within AZOBR_RS17955 at 787.437 kb on + strand at 787.437 kb on + strand at 787.437 kb on + strand at 787.438 kb on - strand at 787.438 kb on - strand at 787.438 kb on - strand at 787.438 kb on - strand at 787.873 kb on + strand, within AZOBR_RS17960 at 787.873 kb on + strand, within AZOBR_RS17960 at 787.874 kb on - strand, within AZOBR_RS17960 at 787.905 kb on + strand, within AZOBR_RS17960 at 787.905 kb on + strand, within AZOBR_RS17960 at 787.905 kb on + strand, within AZOBR_RS17960 at 787.906 kb on - strand, within AZOBR_RS17960 at 787.906 kb on - strand, within AZOBR_RS17960 at 787.906 kb on - strand, within AZOBR_RS17960 at 787.906 kb on - strand, within AZOBR_RS17960 at 788.052 kb on + strand, within AZOBR_RS17960 at 788.053 kb on - strand, within AZOBR_RS17960 at 788.053 kb on - strand, within AZOBR_RS17960 at 788.053 kb on - strand, within AZOBR_RS17960 at 788.053 kb on - strand, within AZOBR_RS17960 at 788.136 kb on + strand at 788.136 kb on + strand at 788.137 kb on - strand at 788.137 kb on - strand at 788.178 kb on + strand at 788.178 kb on + strand at 788.178 kb on + strand at 788.178 kb on + strand at 788.178 kb on + strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.179 kb on - strand at 788.180 kb on + strand at 788.180 kb on + strand at 788.180 kb on + strand at 788.181 kb on - strand at 788.181 kb on - strand at 788.181 kb on - strand at 788.190 kb on + strand at 788.190 kb on + strand at 788.190 kb on + strand at 788.190 kb on + strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.191 kb on - strand at 788.192 kb on + strand at 788.192 kb on + strand at 788.193 kb on - strand at 788.193 kb on - strand at 788.416 kb on + strand at 788.551 kb on + strand, within AZOBR_RS17965 at 788.605 kb on + strand, within AZOBR_RS17965 at 788.606 kb on - strand, within AZOBR_RS17965 at 788.644 kb on + strand, within AZOBR_RS17965 at 788.644 kb on + strand, within AZOBR_RS17965 at 788.645 kb on - strand, within AZOBR_RS17965 at 788.645 kb on - strand, within AZOBR_RS17965 at 788.882 kb on - strand, within AZOBR_RS17965 at 788.983 kb on + strand, within AZOBR_RS17965 at 788.984 kb on - strand, within AZOBR_RS17965 at 789.010 kb on + strand, within AZOBR_RS17965 at 789.011 kb on - strand, within AZOBR_RS17965 at 789.011 kb on - strand, within AZOBR_RS17965 at 789.011 kb on - strand, within AZOBR_RS17965 at 789.152 kb on - strand, within AZOBR_RS17965
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 786,739 + AZOBR_RS17955 0.29 -0.7 786,994 + AZOBR_RS17955 0.57 -0.8 786,994 + AZOBR_RS17955 0.57 -0.2 786,995 - AZOBR_RS17955 0.57 -0.2 787,015 + AZOBR_RS17955 0.59 -0.7 787,072 + AZOBR_RS17955 0.65 +0.5 787,072 + AZOBR_RS17955 0.65 -0.1 787,072 + AZOBR_RS17955 0.65 -0.4 787,072 + AZOBR_RS17955 0.65 +0.1 787,072 + AZOBR_RS17955 0.65 +0.5 787,073 - AZOBR_RS17955 0.65 -0.4 787,073 - AZOBR_RS17955 0.65 -0.1 787,073 - AZOBR_RS17955 0.65 +0.3 787,075 + AZOBR_RS17955 0.66 +0.3 787,075 + AZOBR_RS17955 0.66 +0.0 787,075 + AZOBR_RS17955 0.66 +0.0 787,075 + AZOBR_RS17955 0.66 +0.1 787,076 - AZOBR_RS17955 0.66 -0.8 787,076 - AZOBR_RS17955 0.66 -0.3 787,076 - AZOBR_RS17955 0.66 -0.5 787,076 - AZOBR_RS17955 0.66 -0.3 787,076 - AZOBR_RS17955 0.66 -0.2 787,076 - AZOBR_RS17955 0.66 -0.4 787,124 - AZOBR_RS17955 0.71 -0.6 787,124 - AZOBR_RS17955 0.71 -0.2 787,437 + -0.1 787,437 + +0.2 787,437 + +0.1 787,438 - +0.4 787,438 - +1.0 787,438 - -0.3 787,438 - +2.0 787,873 + AZOBR_RS17960 0.63 -0.3 787,873 + AZOBR_RS17960 0.63 +0.1 787,874 - AZOBR_RS17960 0.63 -0.0 787,905 + AZOBR_RS17960 0.67 -0.4 787,905 + AZOBR_RS17960 0.67 -0.7 787,905 + AZOBR_RS17960 0.67 -0.2 787,906 - AZOBR_RS17960 0.67 -0.1 787,906 - AZOBR_RS17960 0.67 +0.4 787,906 - AZOBR_RS17960 0.67 +1.1 787,906 - AZOBR_RS17960 0.67 -0.2 788,052 + AZOBR_RS17960 0.86 +0.3 788,053 - AZOBR_RS17960 0.86 -0.1 788,053 - AZOBR_RS17960 0.86 +0.2 788,053 - AZOBR_RS17960 0.86 -0.7 788,053 - AZOBR_RS17960 0.86 -0.3 788,136 + -0.2 788,136 + +0.2 788,137 - -0.7 788,137 - -0.3 788,178 + -0.4 788,178 + -0.4 788,178 + -0.6 788,178 + -0.4 788,178 + +0.0 788,179 - -1.0 788,179 - -0.3 788,179 - -1.4 788,179 - -0.1 788,179 - +0.1 788,179 - -0.5 788,179 - +0.2 788,179 - +0.2 788,179 - -0.5 788,179 - +0.2 788,179 - +0.2 788,179 - +0.3 788,179 - -0.1 788,180 + +0.5 788,180 + -0.2 788,180 + +0.5 788,181 - +0.3 788,181 - +0.2 788,181 - +0.3 788,190 + -0.4 788,190 + +0.2 788,190 + -0.3 788,190 + -0.6 788,191 - +0.3 788,191 - -0.1 788,191 - -0.4 788,191 - -0.3 788,191 - +0.4 788,191 - +0.1 788,191 - -0.1 788,191 - -0.1 788,191 - +0.0 788,191 - +0.2 788,191 - +0.2 788,192 + +0.1 788,192 + +0.3 788,193 - -0.1 788,193 - +0.1 788,416 + +1.2 788,551 + AZOBR_RS17965 0.10 -0.6 788,605 + AZOBR_RS17965 0.13 +0.4 788,606 - AZOBR_RS17965 0.13 +0.1 788,644 + AZOBR_RS17965 0.14 -0.0 788,644 + AZOBR_RS17965 0.14 -0.0 788,645 - AZOBR_RS17965 0.14 +0.1 788,645 - AZOBR_RS17965 0.14 -0.0 788,882 - AZOBR_RS17965 0.25 +0.1 788,983 + AZOBR_RS17965 0.30 -0.5 788,984 - AZOBR_RS17965 0.30 +0.3 789,010 + AZOBR_RS17965 0.31 +0.2 789,011 - AZOBR_RS17965 0.31 -1.0 789,011 - AZOBR_RS17965 0.31 -0.3 789,011 - AZOBR_RS17965 0.31 +0.3 789,152 - AZOBR_RS17965 0.38 -0.2
Or see this region's nucleotide sequence