Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS01735 and AZOBR_RS01740 are separated by 6 nucleotides AZOBR_RS01740 and AZOBR_RS01745 are separated by 99 nucleotides AZOBR_RS01745 and AZOBR_RS01750 are separated by 48 nucleotides
AZOBR_RS01735: AZOBR_RS01735 - death-on-curing protein, at 355,464 to 355,907
_RS01735
AZOBR_RS01740: AZOBR_RS01740 - AbrB family transcriptional regulator, at 355,914 to 356,138
_RS01740
AZOBR_RS01745: AZOBR_RS01745 - membrane protein, at 356,238 to 356,666
_RS01745
AZOBR_RS01750: AZOBR_RS01750 - uroporphyrinogen decarboxylase, at 356,715 to 357,761
_RS01750
Position (kb) 355
356 Strain fitness (log2 ratio) -1
0
1 at 354.817 kb on - strand at 354.817 kb on - strand at 354.903 kb on + strand at 354.904 kb on - strand at 355.311 kb on + strand at 355.312 kb on - strand at 355.312 kb on - strand at 355.466 kb on - strand at 355.504 kb on + strand at 355.504 kb on + strand at 355.505 kb on - strand at 355.505 kb on - strand at 355.505 kb on - strand at 355.744 kb on + strand, within AZOBR_RS01735 at 355.745 kb on - strand, within AZOBR_RS01735 at 355.759 kb on + strand, within AZOBR_RS01735 at 355.877 kb on - strand at 355.916 kb on - strand at 355.987 kb on + strand, within AZOBR_RS01740 at 356.171 kb on - strand at 356.171 kb on - strand at 356.183 kb on + strand at 356.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 354,817 - -0.6 354,817 - +0.2 354,903 + -0.0 354,904 - +0.1 355,311 + -0.0 355,312 - -0.9 355,312 - +0.6 355,466 - +1.0 355,504 + -0.3 355,504 + -0.4 355,505 - +0.0 355,505 - +1.0 355,505 - +0.3 355,744 + AZOBR_RS01735 0.63 -0.2 355,745 - AZOBR_RS01735 0.63 -0.2 355,759 + AZOBR_RS01735 0.66 -0.4 355,877 - +0.1 355,916 - +0.3 355,987 + AZOBR_RS01740 0.32 +0.2 356,171 - -0.7 356,171 - +0.6 356,183 + +0.6 356,232 - -0.4
Or see this region's nucleotide sequence