Experiment: McCas_H2_complete molybdate 45.4545454545455 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS06150 and MMP_RS06155 are separated by 103 nucleotides MMP_RS06155 and MMP_RS06160 are separated by 77 nucleotides MMP_RS06160 and MMP_RS06165 are separated by 182 nucleotides
MMP_RS06150: MMP_RS06150 - hypothetical protein, at 1,180,541 to 1,182,589
_RS06150
MMP_RS06155: MMP_RS06155 - DUF4186 domain-containing protein, at 1,182,693 to 1,183,064
_RS06155
MMP_RS06160: MMP_RS06160 - hypothetical protein, at 1,183,142 to 1,183,690
_RS06160
MMP_RS06165: MMP_RS06165 - ABC transporter permease, at 1,183,873 to 1,184,634
_RS06165
Position (kb)
1182
1183
1184 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1181.760 kb on + strand, within MMP_RS06150 at 1181.880 kb on - strand, within MMP_RS06150 at 1181.886 kb on - strand, within MMP_RS06150 at 1181.898 kb on - strand, within MMP_RS06150 at 1181.968 kb on + strand, within MMP_RS06150 at 1182.141 kb on + strand, within MMP_RS06150 at 1182.268 kb on - strand, within MMP_RS06150 at 1182.268 kb on - strand, within MMP_RS06150 at 1182.358 kb on - strand, within MMP_RS06150 at 1182.359 kb on + strand, within MMP_RS06150 at 1182.420 kb on - strand at 1182.420 kb on - strand at 1182.421 kb on + strand at 1182.421 kb on + strand at 1182.426 kb on + strand at 1182.456 kb on - strand at 1182.459 kb on - strand at 1182.460 kb on + strand at 1182.490 kb on - strand at 1182.491 kb on + strand at 1182.491 kb on + strand at 1182.491 kb on + strand at 1182.494 kb on - strand at 1182.522 kb on - strand at 1182.525 kb on - strand at 1182.526 kb on + strand at 1182.526 kb on + strand at 1182.638 kb on + strand at 1182.648 kb on - strand at 1182.675 kb on + strand at 1182.678 kb on + strand at 1182.688 kb on - strand at 1182.693 kb on + strand at 1182.693 kb on + strand at 1182.844 kb on - strand, within MMP_RS06155 at 1182.947 kb on - strand, within MMP_RS06155 at 1182.957 kb on + strand, within MMP_RS06155 at 1183.073 kb on + strand at 1183.087 kb on - strand at 1183.090 kb on + strand at 1183.101 kb on - strand at 1183.118 kb on + strand at 1183.126 kb on + strand at 1183.126 kb on + strand at 1183.387 kb on + strand at 1183.477 kb on + strand at 1183.612 kb on - strand at 1183.613 kb on + strand at 1183.616 kb on - strand at 1183.616 kb on - strand at 1183.617 kb on + strand at 1183.688 kb on - strand at 1183.719 kb on - strand at 1183.719 kb on - strand at 1183.768 kb on + strand at 1183.768 kb on + strand at 1183.801 kb on - strand at 1183.826 kb on - strand at 1183.860 kb on + strand at 1183.894 kb on + strand at 1183.898 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction McCas_H2_complete molybdate 45.4545454545455 mM remove 1,181,760 + MMP_RS06150 0.59 +1.8 1,181,880 - MMP_RS06150 0.65 +0.4 1,181,886 - MMP_RS06150 0.66 +0.3 1,181,898 - MMP_RS06150 0.66 +0.2 1,181,968 + MMP_RS06150 0.70 -0.4 1,182,141 + MMP_RS06150 0.78 -0.5 1,182,268 - MMP_RS06150 0.84 +0.6 1,182,268 - MMP_RS06150 0.84 +0.8 1,182,358 - MMP_RS06150 0.89 -0.2 1,182,359 + MMP_RS06150 0.89 +0.4 1,182,420 - +0.3 1,182,420 - -0.1 1,182,421 + +0.4 1,182,421 + -0.1 1,182,426 + +0.0 1,182,456 - -0.6 1,182,459 - -1.9 1,182,460 + +0.3 1,182,490 - -0.2 1,182,491 + +0.8 1,182,491 + +0.3 1,182,491 + +0.1 1,182,494 - +1.8 1,182,522 - +0.5 1,182,525 - +0.2 1,182,526 + -0.6 1,182,526 + +0.1 1,182,638 + +0.6 1,182,648 - +0.7 1,182,675 + +0.7 1,182,678 + +0.6 1,182,688 - +0.4 1,182,693 + -0.9 1,182,693 + -0.4 1,182,844 - MMP_RS06155 0.41 -1.0 1,182,947 - MMP_RS06155 0.68 -0.4 1,182,957 + MMP_RS06155 0.71 -0.4 1,183,073 + +0.4 1,183,087 - -1.3 1,183,090 + -0.2 1,183,101 - -0.6 1,183,118 + +0.2 1,183,126 + +1.1 1,183,126 + +1.4 1,183,387 + -0.2 1,183,477 + +1.6 1,183,612 - -0.1 1,183,613 + -0.8 1,183,616 - +0.3 1,183,616 - -1.2 1,183,617 + +1.8 1,183,688 - -1.5 1,183,719 - -0.3 1,183,719 - +0.3 1,183,768 + +0.8 1,183,768 + -0.5 1,183,801 - +0.3 1,183,826 - -0.8 1,183,860 + -0.6 1,183,894 + -0.7 1,183,898 - -0.7
Or see this region's nucleotide sequence