Strain Fitness in Azospirillum brasilense Sp245 around AZOBR_RS19135

Experiment: DMSO control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAZOBR_RS19130 and AZOBR_RS19135 are separated by 433 nucleotidesAZOBR_RS19135 and AZOBR_RS19140 are separated by 82 nucleotidesAZOBR_RS19140 and AZOBR_RS19145 are separated by 41 nucleotides AZOBR_RS19130: AZOBR_RS19130 - hypothetical protein, at 1,062,120 to 1,062,656 _RS19130 AZOBR_RS19135: AZOBR_RS19135 - hypothetical protein, at 1,063,090 to 1,063,320 _RS19135 AZOBR_RS19140: AZOBR_RS19140 - hypothetical protein, at 1,063,403 to 1,064,056 _RS19140 AZOBR_RS19145: AZOBR_RS19145 - ABC transporter, at 1,064,098 to 1,064,856 _RS19145 Position (kb) 1063 1064Strain fitness (log2 ratio) -1 0 1at 1063.395 kb on + strandat 1063.395 kb on + strandat 1063.395 kb on + strandat 1063.395 kb on + strandat 1063.396 kb on - strandat 1064.154 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction DMSO control
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1,063,395 + +0.2
1,063,395 + -0.1
1,063,395 + +0.1
1,063,395 + +0.3
1,063,396 - +0.0
1,064,154 - -0.1

Or see this region's nucleotide sequence