Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS17560 and AZOBR_RS17565 are separated by 117 nucleotides AZOBR_RS17565 and AZOBR_RS17570 are separated by 22 nucleotides AZOBR_RS17570 and AZOBR_RS17575 are separated by 117 nucleotides AZOBR_RS17575 and AZOBR_RS17580 are separated by 4 nucleotides
AZOBR_RS17560: AZOBR_RS17560 - hypothetical protein, at 697,962 to 698,918
_RS17560
AZOBR_RS17565: AZOBR_RS17565 - hypothetical protein, at 699,036 to 699,242
_RS17565
AZOBR_RS17570: AZOBR_RS17570 - hypothetical protein, at 699,265 to 699,939
_RS17570
AZOBR_RS17575: AZOBR_RS17575 - tRNA-Asn, at 700,057 to 700,132
_RS17575
AZOBR_RS17580: AZOBR_RS17580 - tRNA-Asp, at 700,137 to 700,213
_RS17580
Position (kb) 699
700 Strain fitness (log2 ratio) -1
0
1 at 698.040 kb on + strand at 698.040 kb on + strand at 698.041 kb on - strand at 698.041 kb on - strand at 698.199 kb on + strand, within AZOBR_RS17560 at 698.314 kb on - strand, within AZOBR_RS17560 at 698.674 kb on - strand, within AZOBR_RS17560 at 698.948 kb on + strand at 698.989 kb on - strand at 699.554 kb on + strand, within AZOBR_RS17570 at 700.041 kb on - strand at 700.041 kb on - strand at 700.043 kb on - strand at 700.043 kb on - strand at 700.065 kb on - strand, within AZOBR_RS17575
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 698,040 + +0.2 698,040 + -0.4 698,041 - -0.3 698,041 - -0.6 698,199 + AZOBR_RS17560 0.25 +0.1 698,314 - AZOBR_RS17560 0.37 -0.2 698,674 - AZOBR_RS17560 0.74 +0.2 698,948 + +0.7 698,989 - -0.2 699,554 + AZOBR_RS17570 0.43 +0.7 700,041 - -0.8 700,041 - -0.1 700,043 - +0.8 700,043 - -1.2 700,065 - AZOBR_RS17575 0.11 -0.8
Or see this region's nucleotide sequence