Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS12680 and AZOBR_RS12685 are separated by 240 nucleotides AZOBR_RS12685 and AZOBR_RS12690 are separated by 95 nucleotides AZOBR_RS12690 and AZOBR_RS12695 are separated by 140 nucleotides
AZOBR_RS12680: AZOBR_RS12680 - MFS transporter, at 2,678,979 to 2,679,542
_RS12680
AZOBR_RS12685: AZOBR_RS12685 - ubiquinone biosynthesis protein UbiB, at 2,679,783 to 2,680,310
_RS12685
AZOBR_RS12690: AZOBR_RS12690 - disulfide bond formation protein, at 2,680,406 to 2,680,930
_RS12690
AZOBR_RS12695: AZOBR_RS12695 - tRNA-Leu, at 2,681,071 to 2,681,157
_RS12695
Position (kb)
2679
2680
2681 Strain fitness (log2 ratio)
-1
0
1 at 2678.854 kb on + strand at 2678.872 kb on + strand at 2678.872 kb on + strand at 2678.872 kb on + strand at 2678.872 kb on + strand at 2678.873 kb on - strand at 2678.873 kb on - strand at 2678.879 kb on + strand at 2678.879 kb on + strand at 2678.879 kb on + strand at 2678.879 kb on + strand at 2678.879 kb on + strand at 2678.880 kb on - strand at 2678.880 kb on - strand at 2678.880 kb on - strand at 2678.883 kb on + strand at 2678.883 kb on + strand at 2678.884 kb on - strand at 2678.884 kb on - strand at 2678.884 kb on - strand at 2678.884 kb on - strand at 2678.884 kb on - strand at 2678.884 kb on - strand at 2678.965 kb on + strand at 2678.965 kb on + strand at 2678.965 kb on + strand at 2678.966 kb on - strand at 2678.966 kb on - strand at 2679.042 kb on + strand, within AZOBR_RS12680 at 2679.043 kb on - strand, within AZOBR_RS12680 at 2679.043 kb on - strand, within AZOBR_RS12680 at 2679.043 kb on - strand, within AZOBR_RS12680 at 2679.043 kb on - strand, within AZOBR_RS12680 at 2679.121 kb on - strand, within AZOBR_RS12680 at 2679.540 kb on + strand at 2679.540 kb on + strand at 2679.540 kb on + strand at 2679.636 kb on + strand at 2679.637 kb on - strand at 2679.637 kb on - strand at 2679.672 kb on + strand at 2679.673 kb on - strand at 2680.441 kb on - strand at 2680.964 kb on - strand at 2680.964 kb on - strand at 2681.264 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 2,678,854 + +0.3 2,678,872 + -0.1 2,678,872 + +0.7 2,678,872 + -0.3 2,678,872 + +0.2 2,678,873 - +0.2 2,678,873 - -0.8 2,678,879 + -0.4 2,678,879 + -0.0 2,678,879 + -0.3 2,678,879 + -0.9 2,678,879 + -0.3 2,678,880 - -1.7 2,678,880 - +1.4 2,678,880 - -0.0 2,678,883 + -0.0 2,678,883 + -0.8 2,678,884 - -0.2 2,678,884 - -0.1 2,678,884 - +0.1 2,678,884 - +1.4 2,678,884 - +0.5 2,678,884 - -0.4 2,678,965 + +0.6 2,678,965 + -0.1 2,678,965 + +0.6 2,678,966 - +0.1 2,678,966 - +0.1 2,679,042 + AZOBR_RS12680 0.11 +0.6 2,679,043 - AZOBR_RS12680 0.11 +0.4 2,679,043 - AZOBR_RS12680 0.11 -0.4 2,679,043 - AZOBR_RS12680 0.11 -0.0 2,679,043 - AZOBR_RS12680 0.11 -0.1 2,679,121 - AZOBR_RS12680 0.25 +0.1 2,679,540 + +0.4 2,679,540 + -0.0 2,679,540 + -0.1 2,679,636 + +0.3 2,679,637 - +0.1 2,679,637 - -0.1 2,679,672 + +0.5 2,679,673 - +0.6 2,680,441 - +0.2 2,680,964 - +0.0 2,680,964 - +0.8 2,681,264 - +0.0
Or see this region's nucleotide sequence