Experiment: DMSO control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS06005 and AZOBR_RS06010 are separated by 259 nucleotides AZOBR_RS06010 and AZOBR_RS06015 are separated by 20 nucleotides AZOBR_RS06015 and AZOBR_RS06020 are separated by 74 nucleotides AZOBR_RS06020 and AZOBR_RS06025 are separated by 148 nucleotides
AZOBR_RS06005: AZOBR_RS06005 - hypothetical protein, at 1,278,822 to 1,279,202
_RS06005
AZOBR_RS06010: AZOBR_RS06010 - regulator, at 1,279,462 to 1,279,866
_RS06010
AZOBR_RS06015: AZOBR_RS06015 - hypothetical protein, at 1,279,887 to 1,280,237
_RS06015
AZOBR_RS06020: AZOBR_RS06020 - tRNA-Tyr, at 1,280,312 to 1,280,397
_RS06020
AZOBR_RS06025: AZOBR_RS06025 - hydrogenase, at 1,280,546 to 1,281,172
_RS06025
Position (kb)
1279
1280 Strain fitness (log2 ratio)
-1
0
1
2 at 1278.591 kb on + strand at 1278.592 kb on - strand at 1278.596 kb on + strand at 1278.597 kb on - strand at 1278.597 kb on - strand at 1278.597 kb on - strand at 1278.719 kb on + strand at 1278.720 kb on - strand at 1278.759 kb on + strand at 1278.821 kb on + strand at 1278.821 kb on + strand at 1278.821 kb on + strand at 1278.822 kb on - strand at 1278.822 kb on - strand at 1278.822 kb on - strand at 1279.355 kb on + strand at 1279.356 kb on - strand at 1279.492 kb on + strand at 1279.492 kb on + strand at 1279.493 kb on - strand at 1279.493 kb on - strand at 1280.070 kb on + strand, within AZOBR_RS06015 at 1280.106 kb on + strand, within AZOBR_RS06015 at 1280.107 kb on - strand, within AZOBR_RS06015 at 1280.116 kb on - strand, within AZOBR_RS06015 at 1280.116 kb on - strand, within AZOBR_RS06015 at 1280.116 kb on - strand, within AZOBR_RS06015 at 1280.118 kb on + strand, within AZOBR_RS06015 at 1280.119 kb on - strand, within AZOBR_RS06015 at 1280.119 kb on - strand, within AZOBR_RS06015 at 1280.342 kb on - strand, within AZOBR_RS06020 at 1280.473 kb on + strand at 1280.473 kb on + strand at 1280.478 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction DMSO control remove 1,278,591 + -0.6 1,278,592 - +0.6 1,278,596 + -0.3 1,278,597 - -0.1 1,278,597 - -0.3 1,278,597 - -0.8 1,278,719 + +0.1 1,278,720 - +1.8 1,278,759 + +0.5 1,278,821 + -0.6 1,278,821 + -0.0 1,278,821 + +0.1 1,278,822 - +1.8 1,278,822 - +0.0 1,278,822 - -0.2 1,279,355 + -0.1 1,279,356 - -0.2 1,279,492 + +1.0 1,279,492 + +0.2 1,279,493 - -0.4 1,279,493 - +1.1 1,280,070 + AZOBR_RS06015 0.52 -1.2 1,280,106 + AZOBR_RS06015 0.62 -0.5 1,280,107 - AZOBR_RS06015 0.63 -0.3 1,280,116 - AZOBR_RS06015 0.65 +0.3 1,280,116 - AZOBR_RS06015 0.65 +0.4 1,280,116 - AZOBR_RS06015 0.65 +0.5 1,280,118 + AZOBR_RS06015 0.66 -0.1 1,280,119 - AZOBR_RS06015 0.66 +0.3 1,280,119 - AZOBR_RS06015 0.66 +0.2 1,280,342 - AZOBR_RS06020 0.35 -1.6 1,280,473 + -0.2 1,280,473 + +0.8 1,280,478 - +1.8
Or see this region's nucleotide sequence