Strain Fitness in Methanococcus maripaludis S2 around MMP_RS09060

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,596,213	+		MMP_RS08490	0.70	+1.3
1,596,217	-		MMP_RS08490	0.70	-0.2
1,596,293	+		MMP_RS08490	0.73	+0.9
1,596,351	-		MMP_RS08490	0.75	-1.0
1,596,362	+		MMP_RS08490	0.75	+2.6
1,596,378	+		MMP_RS08490	0.76	-0.4
1,596,390	-		MMP_RS08490	0.76	+2.9
1,596,404	-		MMP_RS08490	0.76	-0.8
1,596,408	+		MMP_RS08490	0.77	-0.2
1,596,502	-		MMP_RS08490	0.80	+0.6
1,596,527	+		MMP_RS08490	0.80	+0.4
1,596,541	-		MMP_RS08490	0.81	+0.9
1,596,621	+		MMP_RS08490	0.84	+1.4
1,596,672	+		MMP_RS08490	0.85	-0.9
1,596,741	+		MMP_RS08490	0.87	+0.6
1,596,774	-		MMP_RS08490	0.88	+0.8
1,596,884	+				+0.3
1,596,971	-				+0.0
1,596,976	-				+0.5
1,596,976	-				+1.2
1,596,980	+				+2.5
1,597,008	+				+1.6
1,597,010	+				+2.3
1,597,046	+				-0.8
1,597,086	+				+1.1
1,597,174	-				+0.5
1,597,178	-				+0.5
1,597,178	-				+0.2
1,597,179	+				+0.2
1,597,197	+				+1.1
1,597,318	+		MMP_RS09060	0.14	+0.1
1,597,387	-		MMP_RS09060	0.19	-1.8
1,597,397	-		MMP_RS09060	0.20	+0.4
1,597,476	-		MMP_RS09060	0.26	+0.6
1,597,477	+		MMP_RS09060	0.26	-0.9
1,597,484	-		MMP_RS09060	0.26	+0.5
1,597,500	+		MMP_RS09060	0.28	-0.6
1,597,500	+		MMP_RS09060	0.28	+0.2
1,597,500	+		MMP_RS09060	0.28	-0.1
1,597,510	-		MMP_RS09060	0.28	+1.5
1,597,537	+		MMP_RS09060	0.30	+1.7
1,597,537	+		MMP_RS09060	0.30	+0.4
1,597,540	+		MMP_RS09060	0.31	+1.2
1,597,572	+		MMP_RS09060	0.33	+1.6
1,597,576	-		MMP_RS09060	0.33	-0.2
1,597,654	+		MMP_RS09060	0.39	+1.3
1,597,654	+		MMP_RS09060	0.39	+1.6
1,597,741	+		MMP_RS09060	0.46	+0.6
1,597,741	+		MMP_RS09060	0.46	+0.4
1,597,741	+		MMP_RS09060	0.46	+0.1
1,597,774	+		MMP_RS09060	0.48	+1.3
1,597,962	+		MMP_RS09060	0.62	+0.2
1,598,010	+		MMP_RS09060	0.66	+0.5
1,598,045	+		MMP_RS09060	0.68	+1.7
1,598,054	+		MMP_RS09060	0.69	+2.1
1,598,056	+		MMP_RS09060	0.69	-0.1
1,598,110	+		MMP_RS09060	0.73	+0.8
1,598,117	-		MMP_RS09060	0.74	+0.7
1,598,172	-		MMP_RS09060	0.78	+0.3
1,598,241	+		MMP_RS09060	0.83	+1.1
1,598,263	+		MMP_RS09060	0.84	+1.5
1,598,283	-		MMP_RS09060	0.86	-0.5
1,598,475	-				+0.2
1,598,486	-				+1.3
1,598,633	-		MMP_RS09065	0.11	+0.9
1,598,717	-		MMP_RS09065	0.15	+1.0
1,598,745	-		MMP_RS09065	0.17	+0.7
1,598,758	+		MMP_RS09065	0.18	-0.1
1,599,017	-		MMP_RS09065	0.32	+0.7
1,599,029	-		MMP_RS09065	0.33	+0.9
1,599,173	-		MMP_RS09065	0.41	+0.7
1,599,190	-		MMP_RS09065	0.42	+0.4
1,599,207	-		MMP_RS09065	0.43	+1.6
1,599,284	-		MMP_RS09065	0.47	+1.4
1,599,285	+		MMP_RS09065	0.47	+1.0
1,599,285	+		MMP_RS09065	0.47	-1.1
1,599,285	+		MMP_RS09065	0.47	-1.1
1,599,296	-		MMP_RS09065	0.48	-0.1
1,599,363	-		MMP_RS09065	0.52	+0.0
1,599,437	-		MMP_RS09065	0.56	-0.5
1,599,437	-		MMP_RS09065	0.56	+1.8
1,599,437	-		MMP_RS09065	0.56	+0.8
1,599,443	+		MMP_RS09065	0.56	+3.0
1,599,449	-		MMP_RS09065	0.57	+1.5