Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08480

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,590,812	+		MMP_RS08470	0.79	+1.7
1,590,841	-		MMP_RS08470	0.81	+2.4
1,590,842	+		MMP_RS08470	0.81	-0.2
1,590,842	+		MMP_RS08470	0.81	+0.1
1,590,862	-		MMP_RS08470	0.83	-0.5
1,590,947	+				+0.3
1,590,950	-				-0.8
1,590,951	+				-0.3
1,590,970	-				+2.1
1,591,054	-				+0.9
1,591,093	+				+0.7
1,591,150	-		MMP_RS08475	0.15	-1.6
1,591,177	-		MMP_RS08475	0.18	-0.1
1,591,178	+		MMP_RS08475	0.18	-0.2
1,591,183	-		MMP_RS08475	0.19	+0.5
1,591,286	-		MMP_RS08475	0.32	+1.0
1,591,374	-		MMP_RS08475	0.43	+0.2
1,591,374	-		MMP_RS08475	0.43	+1.6
1,591,374	-		MMP_RS08475	0.43	+1.8
1,591,374	-		MMP_RS08475	0.43	+0.5
1,591,374	-		MMP_RS08475	0.43	-1.9
1,591,375	+		MMP_RS08475	0.43	-0.1
1,591,515	-		MMP_RS08475	0.61	+1.1
1,591,728	-		MMP_RS08475	0.89	+4.5
1,591,729	+		MMP_RS08475	0.89	-1.1
1,591,729	+		MMP_RS08475	0.89	-2.2
1,591,733	-		MMP_RS08475	0.89	+0.5
1,591,755	-				+2.9
1,591,865	-				+0.4
1,591,971	+		MMP_RS08480	0.20	+0.5
1,592,000	+		MMP_RS08480	0.24	+1.3
1,592,050	+		MMP_RS08480	0.30	+1.0
1,592,050	+		MMP_RS08480	0.30	+0.3
1,592,130	+		MMP_RS08480	0.40	+1.9
1,592,131	-		MMP_RS08480	0.40	+1.7
1,592,271	+		MMP_RS08480	0.58	+1.4
1,592,271	+		MMP_RS08480	0.58	-1.4
1,592,291	-		MMP_RS08480	0.60	+3.8
1,592,299	+		MMP_RS08480	0.61	+1.6
1,592,349	+		MMP_RS08480	0.67	+1.0
1,592,403	-		MMP_RS08480	0.74	+1.8
1,592,451	+		MMP_RS08480	0.80	-0.3
1,592,451	+		MMP_RS08480	0.80	+2.7
1,592,461	-		MMP_RS08480	0.81	+2.5
1,592,592	+				+2.6
1,592,636	+				+1.3
1,592,800	+		MMP_RS08485	0.11	+3.2
1,592,908	+		MMP_RS08485	0.21	+0.8
1,592,984	+		MMP_RS08485	0.29	+2.7
1,593,016	-		MMP_RS08485	0.32	+1.0
1,593,021	+		MMP_RS08485	0.33	+0.1
1,593,028	-		MMP_RS08485	0.33	+0.8
1,593,035	+		MMP_RS08485	0.34	-0.1
1,593,087	-		MMP_RS08485	0.39	-0.5
1,593,123	-		MMP_RS08485	0.43	+3.3
1,593,133	-		MMP_RS08485	0.44	+0.8
1,593,133	-		MMP_RS08485	0.44	+1.8
1,593,171	+		MMP_RS08485	0.48	+1.2
1,593,194	+		MMP_RS08485	0.50	-0.2
1,593,287	+		MMP_RS08485	0.59	+0.3
1,593,436	+		MMP_RS08485	0.74	+1.1
1,593,436	+		MMP_RS08485	0.74	-0.9
1,593,548	+		MMP_RS08485	0.85	+1.2
1,593,560	+		MMP_RS08485	0.87	+0.6
1,593,610	+				-1.0