Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08410

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,577,957	+		MMP_RS08405	0.31	-0.0
1,577,957	+		MMP_RS08405	0.31	+1.5
1,577,968	+		MMP_RS08405	0.32	+0.5
1,577,973	+		MMP_RS08405	0.32	+0.4
1,578,021	-		MMP_RS08405	0.35	+0.1
1,578,022	+		MMP_RS08405	0.35	+1.2
1,578,042	-		MMP_RS08405	0.37	-1.7
1,578,058	-		MMP_RS08405	0.38	+1.3
1,578,059	+		MMP_RS08405	0.38	-0.6
1,578,177	-		MMP_RS08405	0.47	+1.2
1,578,300	+		MMP_RS08405	0.56	-1.2
1,578,568	+		MMP_RS08405	0.75	+2.2
1,578,584	-		MMP_RS08405	0.76	-0.3
1,578,628	+		MMP_RS08405	0.80	-1.0
1,578,764	+		MMP_RS08405	0.90	+0.4
1,578,904	-				+0.5
1,578,908	-				-0.1
1,579,187	-		MMP_RS08410	0.39	+1.5
1,579,194	+		MMP_RS08410	0.40	+4.5
1,579,396	-		MMP_RS08410	0.69	+0.4
1,579,397	+		MMP_RS08410	0.69	+1.9
1,579,524	+		MMP_RS08410	0.88	-0.9
1,579,532	+		MMP_RS08410	0.89	+1.3
1,579,611	-				-0.1
1,579,611	-				-0.5
1,579,611	-				-1.8
1,579,612	+				+0.6
1,579,675	-				-1.0
1,579,676	+				+2.4
1,579,676	+				+1.0
1,579,720	+				+1.2
1,579,720	+				-0.6
1,579,720	+				+0.5
1,579,723	-				+0.1
1,579,724	+				-0.1
1,579,724	+				+1.2
1,579,725	-				-0.2
1,579,725	-				+0.6
1,579,725	-				+0.1
1,579,727	-				-0.0
1,579,727	-				-1.1
1,579,727	-				-0.4
1,579,728	+				+1.0
1,579,728	+				+0.7
1,579,730	-				+1.0
1,579,730	-				+3.0
1,579,733	-				-0.3
1,579,734	+				+0.1
1,579,736	+				-0.1
1,580,269	+		MMP_RS08415	0.55	+0.7
1,580,322	+		MMP_RS08415	0.61	+1.8
1,580,485	+		MMP_RS08415	0.80	-0.5