Strain Fitness in Methanococcus maripaludis S2 around MMP_RS08085

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,521,151	-		MMP_RS08075	0.43	+0.2
1,521,152	+		MMP_RS08075	0.43	-1.4
1,521,158	-		MMP_RS08075	0.45	+0.7
1,521,186	-		MMP_RS08075	0.54	+1.6
1,521,190	+		MMP_RS08075	0.55	-0.2
1,521,348	-				+1.1
1,521,350	-				-0.7
1,521,369	-				+1.2
1,521,370	+				-1.7
1,521,370	+				+1.9
1,521,370	+				-1.4
1,521,373	-				+0.5
1,521,493	-		MMP_RS08080	0.21	+1.2
1,521,493	-		MMP_RS08080	0.21	+0.6
1,521,564	+		MMP_RS08080	0.30	+0.3
1,521,572	+		MMP_RS08080	0.31	+0.4
1,521,577	+		MMP_RS08080	0.32	+0.6
1,521,755	-		MMP_RS08080	0.55	+1.0
1,521,849	-		MMP_RS08080	0.68	+1.0
1,521,868	-		MMP_RS08080	0.70	+0.4
1,521,881	+		MMP_RS08080	0.72	-0.6
1,521,909	+		MMP_RS08080	0.76	+1.1
1,521,977	-		MMP_RS08080	0.85	+1.0
1,522,010	-		MMP_RS08080	0.89	-1.7
1,522,015	-		MMP_RS08080	0.90	+1.0
1,522,015	-		MMP_RS08080	0.90	+2.2
1,522,071	-				+2.1
1,522,076	+				-0.3
1,522,086	+				+1.8
1,522,123	-				-0.3
1,522,265	+		MMP_RS08085	0.17	+0.2
1,522,309	-		MMP_RS08085	0.22	+0.1
1,522,349	+		MMP_RS08085	0.26	+1.1
1,522,377	-		MMP_RS08085	0.29	+1.6
1,522,387	-		MMP_RS08085	0.30	+0.9
1,522,414	-		MMP_RS08085	0.33	+2.4
1,522,458	+		MMP_RS08085	0.38	+1.9
1,522,479	-		MMP_RS08085	0.40	+1.0
1,522,480	+		MMP_RS08085	0.40	+2.8
1,522,570	+		MMP_RS08085	0.50	+0.1
1,522,595	+		MMP_RS08085	0.53	+0.3
1,522,658	-		MMP_RS08085	0.59	+0.1
1,522,664	+		MMP_RS08085	0.60	+0.8
1,522,672	+		MMP_RS08085	0.61	+1.8
1,522,672	+		MMP_RS08085	0.61	+1.1
1,522,704	+		MMP_RS08085	0.64	-1.4
1,522,704	+		MMP_RS08085	0.64	+0.7
1,522,707	+		MMP_RS08085	0.65	+1.1
1,522,727	+		MMP_RS08085	0.67	+0.6
1,522,847	+		MMP_RS08085	0.80	+5.4
1,522,859	+		MMP_RS08085	0.81	+1.2
1,522,951	+				+3.2
1,522,952	-				+0.6
1,522,991	-				+0.9
1,523,023	-				+0.3
1,523,024	+				+0.8
1,523,029	+				+1.1
1,523,029	+				+0.4
1,523,029	+				+1.0
1,523,029	+				-1.5
1,523,040	-				-0.4
1,523,064	-				+0.2
1,523,088	+				+0.6
1,523,091	-				-4.0
1,523,092	+				+0.3
1,523,092	+				-0.5
1,523,092	+				+2.7
1,523,093	-				+1.4
1,523,093	-				-0.1
1,523,094	+				-1.1
1,523,095	-				+2.2
1,523,095	-				-0.6
1,523,104	+				+0.5
1,523,104	+				+0.3
1,523,156	-		MMP_RS08090	0.10	+0.6
1,523,367	-		MMP_RS08090	0.81	+0.3
1,523,371	+		MMP_RS08090	0.82	-0.3
1,523,371	+		MMP_RS08090	0.82	+1.2
1,523,392	+		MMP_RS08090	0.90	+1.1
1,523,451	-				+0.8
1,523,575	+		MMP_RS08095	0.25	+0.4
1,523,707	-		MMP_RS08095	0.48	+0.8
1,523,758	-		MMP_RS08095	0.57	-0.7
1,523,762	-		MMP_RS08095	0.57	-0.3
1,523,763	+		MMP_RS08095	0.57	-0.0
1,523,801	+		MMP_RS08095	0.64	+1.5
1,523,815	-		MMP_RS08095	0.66	+0.5
1,523,920	+		MMP_RS08095	0.85	+1.0
1,523,924	-		MMP_RS08095	0.86	-0.3
1,523,925	+		MMP_RS08095	0.86	+1.2
1,523,925	+		MMP_RS08095	0.86	+1.7
1,523,925	+		MMP_RS08095	0.86	-0.0
1,523,931	-		MMP_RS08095	0.87	+0.9
1,523,962	-				-0.2
1,523,965	+				+2.0
1,523,965	+				+0.3
1,523,965	+				+1.2