Strain Fitness in Methanococcus maripaludis S2 around MMP_RS07720

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,461,546	-				-1.2
1,461,546	-				-1.0
1,461,568	+				-1.7
1,461,604	-				+0.2
1,461,605	+				-1.5
1,461,609	-				-0.6
1,461,610	+				+2.3
1,461,610	+				-1.1
1,461,637	-				-0.3
1,461,681	+				-1.1
1,461,997	-				+0.6
1,462,026	+				-0.4
1,462,061	+				+0.9
1,462,125	-		MMP_RS07715	0.19	+0.5
1,462,126	+		MMP_RS07715	0.19	-0.2
1,462,216	-		MMP_RS07715	0.38	+0.8
1,462,243	+		MMP_RS07715	0.43	+1.1
1,462,309	+		MMP_RS07715	0.57	-1.4
1,462,309	+		MMP_RS07715	0.57	+0.4
1,462,319	-		MMP_RS07715	0.59	-0.8
1,462,319	-		MMP_RS07715	0.59	+0.1
1,462,320	+		MMP_RS07715	0.59	+1.5
1,462,320	+		MMP_RS07715	0.59	+1.7
1,462,363	-		MMP_RS07715	0.67	+1.0
1,462,363	-		MMP_RS07715	0.67	+2.1
1,462,364	+		MMP_RS07715	0.68	+2.2
1,462,419	-		MMP_RS07715	0.79	-0.1
1,462,420	+		MMP_RS07715	0.79	-0.4
1,462,559	+				+0.5
1,462,597	-		MMP_RS07720	0.15	+2.2
1,462,605	-		MMP_RS07720	0.17	-1.0
1,462,609	+		MMP_RS07720	0.18	-0.8
1,462,624	-		MMP_RS07720	0.21	+1.3
1,462,644	+		MMP_RS07720	0.26	-0.4
1,462,644	+		MMP_RS07720	0.26	+2.1
1,462,739	-		MMP_RS07720	0.49	+1.6
1,462,740	+		MMP_RS07720	0.49	+1.3
1,462,740	+		MMP_RS07720	0.49	+1.2
1,462,740	+		MMP_RS07720	0.49	+0.4
1,462,740	+		MMP_RS07720	0.49	+0.4
1,462,769	-		MMP_RS07720	0.56	+0.8
1,462,769	-		MMP_RS07720	0.56	-1.2
1,462,772	-		MMP_RS07720	0.57	+0.3
1,462,775	-		MMP_RS07720	0.58	+1.1
1,462,775	-		MMP_RS07720	0.58	-1.2
1,462,814	-		MMP_RS07720	0.67	-0.3
1,462,814	-		MMP_RS07720	0.67	+1.0
1,462,814	-		MMP_RS07720	0.67	-1.2
1,462,815	+		MMP_RS07720	0.67	+0.4
1,462,853	+		MMP_RS07720	0.76	-0.9
1,462,888	-		MMP_RS07720	0.85	+1.9
1,462,888	-		MMP_RS07720	0.85	-0.2
1,462,889	+		MMP_RS07720	0.85	+2.0
1,462,933	-				+0.7
1,462,943	-				-1.2
1,462,944	+				+0.9
1,462,979	+				+0.5
1,462,996	-				+0.0
1,463,202	-		MMP_RS07725	0.46	-2.1
1,463,203	+		MMP_RS07725	0.46	+1.7
1,463,317	-		MMP_RS07725	0.69	+1.2
1,463,332	-		MMP_RS07725	0.72	-0.1
1,463,740	+		MMP_RS07730	0.27	-0.1
1,463,848	-		MMP_RS07730	0.39	-0.8
1,463,892	-		MMP_RS07730	0.44	-2.1
1,463,893	+		MMP_RS07730	0.44	-3.2