Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06150

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,179,547	-		MMP_RS06145	0.79	-0.4
1,179,628	-		MMP_RS06145	0.81	+0.7
1,179,677	-		MMP_RS06145	0.82	+0.8
1,179,683	+		MMP_RS06145	0.82	+0.2
1,179,842	-		MMP_RS06145	0.86	-0.9
1,179,896	-		MMP_RS06145	0.87	-0.0
1,179,899	-		MMP_RS06145	0.87	-0.8
1,179,899	-		MMP_RS06145	0.87	+2.6
1,179,903	+		MMP_RS06145	0.87	+0.8
1,179,976	-		MMP_RS06145	0.89	+0.9
1,180,078	-				+0.7
1,180,079	+				+2.9
1,180,157	+				+0.9
1,180,185	-				+2.3
1,180,186	+				+0.0
1,180,189	-				+0.9
1,180,189	-				+1.1
1,180,189	-				+0.8
1,180,189	-				+0.4
1,180,189	-				+0.5
1,180,190	+				+1.0
1,180,190	+				+2.5
1,180,190	+				+1.3
1,180,190	+				+1.7
1,180,223	+				+1.5
1,180,224	-				-1.8
1,180,251	+				+2.6
1,180,251	+				+0.9
1,180,270	-				+0.5
1,180,270	-				+1.1
1,180,271	+				+1.4
1,180,271	+				+1.2
1,180,292	+				+1.5
1,180,292	+				-0.1
1,180,301	-				+0.9
1,180,301	-				+1.0
1,180,301	-				+2.5
1,180,305	-				+1.3
1,180,330	-				+1.6
1,180,364	-				+0.4
1,180,441	+				+0.7
1,180,567	+				+0.2
1,180,653	-				+1.2
1,180,853	+		MMP_RS06150	0.15	+0.0
1,180,868	-		MMP_RS06150	0.16	+0.4
1,180,869	+		MMP_RS06150	0.16	+0.5
1,181,415	+		MMP_RS06150	0.43	+0.8
1,181,422	+		MMP_RS06150	0.43	+1.0
1,181,760	+		MMP_RS06150	0.59	+1.4
1,181,880	-		MMP_RS06150	0.65	+1.3
1,181,886	-		MMP_RS06150	0.66	+0.4
1,181,898	-		MMP_RS06150	0.66	+1.2
1,181,968	+		MMP_RS06150	0.70	+0.6
1,182,141	+		MMP_RS06150	0.78	-0.9
1,182,268	-		MMP_RS06150	0.84	-0.4
1,182,268	-		MMP_RS06150	0.84	+0.8
1,182,358	-		MMP_RS06150	0.89	+0.4
1,182,359	+		MMP_RS06150	0.89	+0.1
1,182,420	-				+0.6
1,182,420	-				+0.0
1,182,421	+				+1.8
1,182,421	+				-1.2
1,182,426	+				+0.3
1,182,456	-				-2.3
1,182,459	-				+0.8
1,182,460	+				+0.0
1,182,490	-				+0.9
1,182,491	+				+1.7
1,182,491	+				+0.6
1,182,491	+				-0.7
1,182,494	-				-0.4
1,182,522	-				+2.1
1,182,525	-				-1.0
1,182,526	+				+0.2
1,182,526	+				+1.6
1,182,638	+				+1.1
1,182,648	-				+2.4
1,182,675	+				+1.5
1,182,678	+				+1.4
1,182,688	-				+0.3
1,182,693	+				-1.6
1,182,693	+				-1.1
1,182,844	-		MMP_RS06155	0.41	+2.9
1,182,947	-		MMP_RS06155	0.68	+1.3
1,182,957	+		MMP_RS06155	0.71	+1.3
1,183,073	+				-1.2
1,183,087	-				-0.3
1,183,090	+				-0.2
1,183,101	-				-0.9
1,183,118	+				-0.1
1,183,126	+				+0.1
1,183,126	+				+0.8
1,183,387	+				-2.8
1,183,477	+				+1.0