Strain Fitness in Methanococcus maripaludis S2 around MMP_RS06080

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
1,161,408	-				+1.1
1,161,458	+				+1.1
1,161,462	-				+0.3
1,161,462	-				+0.5
1,161,465	-				+0.7
1,161,465	-				-0.4
1,161,536	-				-1.3
1,161,537	+				+1.0
1,161,537	+				-1.9
1,161,618	+				-0.9
1,161,619	-				+1.7
1,161,619	-				+0.3
1,161,619	-				+1.3
1,161,619	-				-0.3
1,161,619	-				+1.6
1,161,619	-				+0.1
1,161,619	-				+0.4
1,161,619	-				+1.2
1,161,619	-				+1.3
1,161,620	+				-0.6
1,161,620	+				-0.5
1,161,620	+				-0.0
1,161,620	+				-0.9
1,161,620	+				+1.4
1,161,620	+				-0.5
1,161,620	+				+0.9
1,161,620	+				-0.1
1,161,621	-				+2.5
1,161,622	+				+0.2
1,161,666	-				+4.8
1,161,713	+				+1.1
1,161,800	+		MMP_RS06075	0.13	+1.5
1,161,814	-		MMP_RS06075	0.15	+1.7
1,161,853	+		MMP_RS06075	0.21	+0.4
1,161,853	+		MMP_RS06075	0.21	-1.1
1,161,940	-		MMP_RS06075	0.35	+2.0
1,161,941	+		MMP_RS06075	0.35	+1.2
1,161,982	+		MMP_RS06075	0.41	+0.3
1,162,014	-		MMP_RS06075	0.46	+0.4
1,162,014	-		MMP_RS06075	0.46	-0.6
1,162,015	+		MMP_RS06075	0.46	+0.5
1,162,041	+		MMP_RS06075	0.50	+0.9
1,162,071	-		MMP_RS06075	0.54	+0.9
1,162,072	+		MMP_RS06075	0.55	+0.8
1,162,382	-				-0.6
1,162,431	-				-0.0
1,162,431	-				-0.8
1,162,432	+				+0.8
1,162,435	-				-0.3
1,162,436	+				+1.4
1,162,436	+				+0.4
1,162,486	+				+2.0
1,162,556	-		MMP_RS06080	0.11	+1.1
1,162,572	-		MMP_RS06080	0.12	+0.3
1,162,593	-		MMP_RS06080	0.13	+0.6
1,162,593	-		MMP_RS06080	0.13	-0.2
1,162,594	+		MMP_RS06080	0.13	-0.4
1,162,608	+		MMP_RS06080	0.14	+0.9
1,162,736	+		MMP_RS06080	0.21	+0.5
1,162,833	-		MMP_RS06080	0.26	+3.4
1,162,835	-		MMP_RS06080	0.27	+0.5
1,163,048	-		MMP_RS06080	0.39	+2.8
1,163,202	-		MMP_RS06080	0.47	+1.2
1,163,268	-		MMP_RS06080	0.51	+1.3
1,163,268	-		MMP_RS06080	0.51	-0.6
1,163,318	-		MMP_RS06080	0.54	-0.2
1,163,616	+		MMP_RS06080	0.71	-0.3
1,163,781	-		MMP_RS06080	0.80	+0.5
1,163,803	+		MMP_RS06080	0.82	+1.2
1,163,826	-		MMP_RS06080	0.83	+2.5
1,163,827	+		MMP_RS06080	0.83	+0.3
1,163,861	+		MMP_RS06080	0.85	-0.8
1,163,918	-		MMP_RS06080	0.88	+1.9
1,163,918	-		MMP_RS06080	0.88	+0.6
1,163,919	+		MMP_RS06080	0.88	-0.0
1,163,919	+		MMP_RS06080	0.88	-0.2
1,163,927	-		MMP_RS06080	0.89	+0.1
1,164,110	-				+0.0
1,164,110	-				+1.4
1,164,120	-				+1.2
1,164,121	+				+0.8
1,164,125	+				-0.4
1,164,176	-				+0.0
1,164,260	+				+1.4
1,164,295	-				-0.9
1,164,296	+				+2.0
1,164,306	+				+0.8
1,164,522	-		MMP_RS06085	0.18	+0.9
1,164,545	+		MMP_RS06085	0.20	-0.9
1,164,591	+		MMP_RS06085	0.24	+1.1
1,164,636	-		MMP_RS06085	0.28	-0.5
1,164,654	+		MMP_RS06085	0.30	+1.5
1,164,654	+		MMP_RS06085	0.30	+0.9
1,164,697	-		MMP_RS06085	0.33	+0.0
1,164,720	+		MMP_RS06085	0.35	+1.1
1,164,720	+		MMP_RS06085	0.35	-0.7
1,164,758	-		MMP_RS06085	0.39	-1.7
1,164,794	+		MMP_RS06085	0.42	+2.3
1,164,845	-		MMP_RS06085	0.46	-1.1
1,164,851	+		MMP_RS06085	0.47	-1.6
1,164,893	+		MMP_RS06085	0.51	+0.8
1,164,926	+		MMP_RS06085	0.53	-1.4
1,165,020	+		MMP_RS06085	0.62	+1.2
1,165,097	+		MMP_RS06085	0.69	-0.0
1,165,098	-		MMP_RS06085	0.69	-0.2
1,165,120	-		MMP_RS06085	0.71	+0.7