Strain Fitness in Methanococcus maripaludis S2 around MMP_RS05125

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
976,703	-				-2.1
977,280	-				-3.1
977,283	+				-0.7
977,287	-				-2.0
977,371	-				-0.8
977,371	-				-0.4
977,372	+				+0.5
977,372	+				+0.7
977,372	+				+0.1
977,384	+				+0.0
977,385	-				-1.6
977,385	-				-0.7
977,385	-				+0.1
977,386	+				+0.2
977,386	+				-1.8
977,386	+				+0.4
977,387	-				+2.2
977,387	-				+0.2
977,387	-				-1.4
977,388	+				-1.3
977,388	+				-1.5
977,388	+				+0.6
977,389	-				+1.2
977,425	+				+1.1
977,427	-				-0.3
977,436	-				+0.2
977,450	+				-1.6
977,503	-				+0.2
977,527	-				-0.3
977,528	+				+0.7
977,529	-				-1.6
977,530	+				-0.3
977,534	+				+0.3
977,604	-				+1.6
977,673	-		MMP_RS05125	0.11	-0.8
977,673	-		MMP_RS05125	0.11	-1.0
977,708	-		MMP_RS05125	0.15	-0.8
977,735	-		MMP_RS05125	0.19	-1.3
977,736	+		MMP_RS05125	0.19	+0.5
977,736	+		MMP_RS05125	0.19	+0.1
977,736	+		MMP_RS05125	0.19	-0.2
977,736	+		MMP_RS05125	0.19	-0.9
977,737	-		MMP_RS05125	0.19	+0.9
977,739	-		MMP_RS05125	0.19	-0.1
977,740	+		MMP_RS05125	0.19	-0.6
977,740	+		MMP_RS05125	0.19	-3.2
977,787	-		MMP_RS05125	0.26	-0.0
977,788	+		MMP_RS05125	0.26	-2.0
977,791	-		MMP_RS05125	0.26	+0.1
977,791	-		MMP_RS05125	0.26	-0.2
977,791	-		MMP_RS05125	0.26	+0.3
977,792	+		MMP_RS05125	0.26	-0.4
977,952	-		MMP_RS05125	0.47	+1.2
978,072	-		MMP_RS05125	0.63	-1.2
978,137	-		MMP_RS05125	0.71	-0.8
978,193	+		MMP_RS05125	0.79	-1.5
978,214	+		MMP_RS05125	0.81	-1.3
978,224	+		MMP_RS05125	0.83	+1.3
978,299	+				-0.4
978,389	-				+0.5
978,390	+				+0.7
978,393	-				-0.1
978,394	+				-1.4
978,394	+				-0.4
978,396	-				+0.5
978,408	-				-1.0
978,409	+				-0.7
978,423	-				-1.8
978,423	-				-0.3
978,423	-				-0.3
978,424	+				+1.1
978,424	+				+0.6
978,435	-				-0.1
978,439	-				-0.7
978,439	-				+0.5
978,446	-				-0.7
978,447	+				+0.7
978,630	-				-0.5
978,630	-				-0.2
978,631	+				-0.4
978,633	+				-1.3
978,702	-				-0.7
978,703	+				-0.4
978,721	-				-1.4
978,745	-				-0.7
978,745	-				-0.5
978,745	-				-1.1
978,745	-				-1.4
978,746	+				-1.6
978,746	+				-0.5
978,777	-				-1.2
978,874	-				-1.7
978,882	+				-1.4
978,909	-		MMP_RS05130	0.11	-1.5
978,944	+		MMP_RS05130	0.13	-0.4
979,233	-		MMP_RS05130	0.31	-1.1
979,234	+		MMP_RS05130	0.31	-0.8
979,286	-		MMP_RS05130	0.35	-0.4
979,305	+		MMP_RS05130	0.36	-1.1
979,330	-		MMP_RS05130	0.37	-1.2
979,331	+		MMP_RS05130	0.38	-1.7