Strain Fitness in Methanococcus maripaludis S2 around MMP_RS04965

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
945,976	+		MMP_RS04955	0.89	+0.3
946,035	-				+1.0
946,080	-				+1.2
946,120	+				-0.7
946,150	+				+1.1
946,155	-				+0.1
946,234	-				+1.1
946,246	-				+0.1
946,247	+				+1.2
946,247	+				+1.0
946,250	-				-0.7
946,250	-				+0.3
946,251	+				-1.5
946,253	-				+0.8
946,277	-				+1.9
946,277	-				-0.2
946,279	-				-0.1
946,279	-				+0.9
946,280	+				-1.8
946,280	+				+3.0
946,291	-				-0.7
946,292	+				+0.6
946,292	+				-0.9
946,292	+				+0.7
946,292	+				+1.1
946,293	-				+2.7
946,293	-				-0.7
946,293	-				-0.7
946,293	-				+0.8
946,293	-				-0.3
946,293	-				-0.0
946,293	-				+0.5
946,294	+				+0.1
946,294	+				+1.5
946,294	+				-0.6
946,294	+				+0.3
946,294	+				-0.6
946,298	-				+1.8
946,299	+				-0.4
946,300	-				-1.2
946,301	+				-0.1
946,301	+				+1.9
946,316	-		MMP_RS04960	0.12	+0.1
946,328	-		MMP_RS04960	0.14	+0.6
946,328	-		MMP_RS04960	0.14	+1.4
946,479	+		MMP_RS04960	0.37	-1.0
946,480	-		MMP_RS04960	0.37	+0.9
946,480	-		MMP_RS04960	0.37	+0.3
946,480	-		MMP_RS04960	0.37	+0.8
946,481	+		MMP_RS04960	0.37	+0.6
946,539	+		MMP_RS04960	0.46	-1.0
946,600	-		MMP_RS04960	0.55	-0.0
946,601	+		MMP_RS04960	0.56	+0.5
946,619	+		MMP_RS04960	0.58	+0.3
946,619	+		MMP_RS04960	0.58	-0.8
946,622	-		MMP_RS04960	0.59	-0.0
946,623	+		MMP_RS04960	0.59	+1.4
946,764	+		MMP_RS04960	0.80	+0.9
946,766	-		MMP_RS04960	0.81	+0.2
946,917	+				+1.2
947,070	-		MMP_RS04965	0.46	+0.7
947,071	+		MMP_RS04965	0.46	+1.9
947,072	-		MMP_RS04965	0.46	+0.5
947,072	-		MMP_RS04965	0.46	+0.4
947,072	-		MMP_RS04965	0.46	+1.9
947,072	-		MMP_RS04965	0.46	+0.2
947,072	-		MMP_RS04965	0.46	+1.8
947,072	-		MMP_RS04965	0.46	+2.2
947,072	-		MMP_RS04965	0.46	+0.8
947,073	+		MMP_RS04965	0.47	-0.6
947,073	+		MMP_RS04965	0.47	-1.6
947,102	-		MMP_RS04965	0.55	+0.6
947,201	-		MMP_RS04965	0.83	+1.4
947,221	+		MMP_RS04965	0.89	+0.7
947,226	-				+2.8
947,229	+				+0.2
947,229	+				+0.2
947,232	-				-0.0
947,233	+				+1.1
947,233	+				+1.4
947,273	-				-0.8
947,293	-				+0.3
947,392	+		MMP_RS04970	0.13	-0.7
947,434	+		MMP_RS04970	0.18	+1.6
947,488	-		MMP_RS04970	0.24	+0.5
947,635	-		MMP_RS04970	0.40	+0.5
947,653	-		MMP_RS04970	0.42	-0.5
947,674	-		MMP_RS04970	0.44	-0.7
947,675	+		MMP_RS04970	0.44	+1.6
947,675	+		MMP_RS04970	0.44	-1.5
947,694	-		MMP_RS04970	0.46	-0.9
947,695	+		MMP_RS04970	0.47	+4.2
947,706	-		MMP_RS04970	0.48	-1.1
947,706	-		MMP_RS04970	0.48	+1.2
947,708	-		MMP_RS04970	0.48	-1.4
947,708	-		MMP_RS04970	0.48	-0.3
947,708	-		MMP_RS04970	0.48	+0.5
947,786	+		MMP_RS04970	0.57	+2.0
947,828	+		MMP_RS04970	0.61	+2.1
947,847	-		MMP_RS04970	0.63	-0.3
947,847	-		MMP_RS04970	0.63	+0.7
947,847	-		MMP_RS04970	0.63	+2.3
947,847	-		MMP_RS04970	0.63	-0.5
947,863	-		MMP_RS04970	0.65	+0.3
947,863	-		MMP_RS04970	0.65	+0.8
947,864	+		MMP_RS04970	0.65	-1.5
947,866	-		MMP_RS04970	0.65	+1.1
947,883	+		MMP_RS04970	0.67	-0.4
947,925	-		MMP_RS04970	0.72	-0.8
947,930	+		MMP_RS04970	0.73	+1.4
948,172	-				-0.3
948,202	-				+2.8
948,203	+				+0.3
948,220	+				+1.5
948,221	-				-0.3
948,223	-				-1.0
948,223	-				-1.3
948,223	-				-0.6
948,228	-				+0.5
948,228	-				-0.0
948,229	+				+1.1