Strain Fitness in Methanococcus maripaludis S2 around MMP_RS01070

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
199,862	+				-0.3
199,869	-				-1.5
199,938	-		MMP_RS01065	0.18	+1.9
199,946	-		MMP_RS01065	0.20	+0.1
199,946	-		MMP_RS01065	0.20	+0.1
199,972	-		MMP_RS01065	0.23	+0.6
199,972	-		MMP_RS01065	0.23	+2.3
199,972	-		MMP_RS01065	0.23	+0.2
199,973	+		MMP_RS01065	0.23	+0.3
199,997	+		MMP_RS01065	0.27	-0.6
200,037	+		MMP_RS01065	0.32	+1.7
200,037	+		MMP_RS01065	0.32	+0.6
200,037	+		MMP_RS01065	0.32	-0.0
200,060	-		MMP_RS01065	0.36	+0.1
200,093	-		MMP_RS01065	0.40	-1.0
200,094	+		MMP_RS01065	0.41	+1.3
200,156	-		MMP_RS01065	0.49	+1.5
200,189	-		MMP_RS01065	0.54	+0.7
200,189	-		MMP_RS01065	0.54	+2.4
200,197	-		MMP_RS01065	0.55	+0.5
200,202	-		MMP_RS01065	0.56	+0.3
200,212	-		MMP_RS01065	0.57	+0.7
200,256	-		MMP_RS01065	0.64	+3.2
200,257	+		MMP_RS01065	0.64	+0.9
200,283	+		MMP_RS01065	0.67	+1.0
200,549	-				-1.4
200,630	+				-2.4
200,643	+				-0.9
200,644	-				-0.4
200,644	-				-1.3
200,644	-				+0.0
200,644	-				+1.9
200,650	-				-0.6
200,941	-				+0.5
200,942	+				+1.0
200,980	-		MMP_RS01070	0.12	-1.2
200,980	-		MMP_RS01070	0.12	+1.6
200,980	-		MMP_RS01070	0.12	+1.6
200,986	-		MMP_RS01070	0.12	+1.0
200,998	-		MMP_RS01070	0.13	+0.3
201,098	-		MMP_RS01070	0.23	-2.9
201,159	-		MMP_RS01070	0.29	+1.5
201,237	-		MMP_RS01070	0.36	+1.3
201,282	+		MMP_RS01070	0.40	+0.5
201,334	+		MMP_RS01070	0.45	-0.6
201,336	+		MMP_RS01070	0.45	+2.3
201,342	-		MMP_RS01070	0.46	+0.7
201,379	+		MMP_RS01070	0.49	+1.2
201,380	-		MMP_RS01070	0.49	+0.2
201,391	-		MMP_RS01070	0.51	-0.9
201,392	+		MMP_RS01070	0.51	-0.8
201,437	-		MMP_RS01070	0.55	-1.4
201,443	-		MMP_RS01070	0.55	+2.5
201,461	-		MMP_RS01070	0.57	-0.2
201,466	-		MMP_RS01070	0.58	+1.1
201,504	+		MMP_RS01070	0.61	+2.1
201,559	+		MMP_RS01070	0.66	+1.7
201,583	-		MMP_RS01070	0.69	+3.2
201,583	-		MMP_RS01070	0.69	+3.6
201,583	-		MMP_RS01070	0.69	+1.1
201,588	-		MMP_RS01070	0.69	+0.2
201,589	+		MMP_RS01070	0.69	-0.4
201,601	+		MMP_RS01070	0.70	+2.1
201,620	-		MMP_RS01070	0.72	-0.1
201,656	-		MMP_RS01070	0.76	+1.2
201,657	+		MMP_RS01070	0.76	+0.0
201,658	-		MMP_RS01070	0.76	-0.1
201,659	+		MMP_RS01070	0.76	+1.8
201,659	+		MMP_RS01070	0.76	+0.8
201,659	+		MMP_RS01070	0.76	+0.1
201,665	+		MMP_RS01070	0.76	-1.4
201,795	-		MMP_RS01070	0.89	+0.7
201,888	-				-0.7
201,889	+				+2.5
201,894	+				-0.1
201,895	-				+0.8
201,933	-				+0.7
201,938	+				+0.1
202,195	-		MMP_RS01075	0.87	-0.4
202,200	+		MMP_RS01075	0.89	+5.1
202,204	-				-0.1
202,384	+				+0.0
202,394	-				-2.0
202,428	-				+1.3
202,428	-				+1.3
202,464	-				+1.5
202,465	+				+1.8
202,466	-				+0.4
202,466	-				+0.3
202,466	-				-0.4
202,467	+				+2.0
202,488	+				+1.0
202,488	+				+1.5
202,491	+				+2.7
202,494	-				+1.5
202,495	+				+0.1
202,554	-				+0.5
202,760	-		MMP_RS01080	0.31	+1.5
202,771	+		MMP_RS01080	0.32	-1.8
202,771	+		MMP_RS01080	0.32	+0.4
202,800	-		MMP_RS01080	0.36	+0.3
202,814	+		MMP_RS01080	0.37	+1.1
202,846	+		MMP_RS01080	0.41	-0.5
202,852	+		MMP_RS01080	0.42	-2.1