Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00630

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
114,122	+		MMP_RS00620	0.61	-2.6
114,122	+		MMP_RS00620	0.61	-1.1
114,142	-		MMP_RS00620	0.64	-0.2
114,229	-		MMP_RS00620	0.78	+1.3
114,261	-		MMP_RS00620	0.83	+0.2
114,304	+				-0.3
114,346	+				+0.5
114,402	-				+1.5
114,403	+				-0.3
114,405	+				-0.5
114,406	-				+0.6
114,407	+				+1.0
114,409	-				+2.2
114,486	+				+0.2
114,493	+				+1.6
114,503	-				-2.5
114,520	-		MMP_RS00625	0.12	+0.5
114,525	+		MMP_RS00625	0.13	-0.0
114,533	-		MMP_RS00625	0.14	-1.7
114,534	+		MMP_RS00625	0.14	-0.2
114,535	-		MMP_RS00625	0.14	+0.7
114,536	+		MMP_RS00625	0.15	+2.6
114,808	-		MMP_RS00625	0.63	+0.7
114,880	+		MMP_RS00625	0.76	-0.3
114,963	+				-1.1
114,963	+				+2.2
114,964	-				+0.4
114,965	+				-0.5
114,965	+				+0.3
115,069	+				-1.3
115,073	+				-0.5
115,073	+				+2.4
115,135	-				+3.6
115,135	-				-0.7
115,136	+				+1.7
115,326	-		MMP_RS00630	0.37	+1.4
115,344	+		MMP_RS00630	0.40	+1.7
115,615	-		MMP_RS00630	0.89	+0.6
115,616	+		MMP_RS00630	0.89	+1.3
115,616	+		MMP_RS00630	0.89	-0.1
115,618	-		MMP_RS00630	0.89	+0.4
115,618	-		MMP_RS00630	0.89	+0.6
115,619	+		MMP_RS00630	0.89	+2.3
115,676	+				+0.8
115,851	+		MMP_RS00635	0.31	+0.6
115,890	-		MMP_RS00635	0.39	+2.5
115,901	+		MMP_RS00635	0.41	+0.5
115,916	+		MMP_RS00635	0.44	+0.6
116,158	-		MMP_RS00635	0.90	+1.6
116,159	+				+0.8
116,271	+				+1.2
116,329	+				-1.2
116,347	-				-0.1
116,350	-				-1.0
116,435	-				-0.1
116,671	+		MMP_RS00640	0.31	+0.4