Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00565

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
109,552	-		MMP_RS00560	0.22	+0.6
109,552	-		MMP_RS00560	0.22	+2.8
109,639	-		MMP_RS00560	0.29	+2.8
109,639	-		MMP_RS00560	0.29	+0.8
109,663	+		MMP_RS00560	0.31	+0.3
109,665	-		MMP_RS00560	0.31	-1.3
109,673	+		MMP_RS00560	0.32	-0.2
109,857	-		MMP_RS00560	0.47	+0.6
109,863	-		MMP_RS00560	0.48	+0.6
109,863	-		MMP_RS00560	0.48	-0.7
109,864	+		MMP_RS00560	0.48	+2.1
109,868	+		MMP_RS00560	0.48	+0.8
109,894	+		MMP_RS00560	0.51	-0.1
110,130	+		MMP_RS00560	0.71	-0.3
110,342	+		MMP_RS00560	0.89	-0.1
110,401	+				-0.2
110,425	+				+0.2
110,466	-				-1.2
110,466	-				-0.4
110,640	+		MMP_RS00565	0.31	+0.6
110,730	-		MMP_RS00565	0.49	+1.9
110,731	+		MMP_RS00565	0.50	+1.2
110,741	-		MMP_RS00565	0.52	+2.5
110,783	+		MMP_RS00565	0.60	+3.0
110,823	-		MMP_RS00565	0.69	+2.3
110,882	-		MMP_RS00565	0.81	-0.9
110,934	+				+2.3
110,944	-				-0.4
111,004	-				+1.9
111,004	-				-2.4
111,005	+				+0.3
111,005	+				+1.7
111,006	-				+1.4
111,006	-				+1.3
111,006	-				+1.1
111,007	+				+0.8
111,007	+				+1.6
111,007	+				+2.0
111,007	+				-1.8
111,007	+				-0.3
111,022	-				+1.2
111,024	-				+2.4
111,024	-				+2.6
111,025	+				-2.0
111,025	+				+0.0
111,025	+				+1.5
111,061	-				+0.4
111,061	-				+1.5
111,072	+				-0.0
111,072	+				+1.5
111,115	-				+1.1
111,237	-		MMP_RS00570	0.27	-0.6
111,302	-		MMP_RS00570	0.37	+0.1
111,700	-				+1.5
111,786	-				-0.4
111,789	-				-0.9