Strain Fitness in Methanococcus maripaludis S2 around MMP_RS00445

Experiment: McCas_H2_complete Antimycin A 0.01 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	McCas_H2_complete Antimycin A 0.01 mM
86,968	-		MMP_RS00435	0.49	+1.0
86,987	-		MMP_RS00435	0.51	+1.3
87,110	-		MMP_RS00435	0.67	+0.6
87,113	+		MMP_RS00435	0.67	+0.6
87,134	-		MMP_RS00435	0.70	+1.0
87,218	+		MMP_RS00435	0.80	+1.0
87,363	-				+0.7
87,368	-				+0.3
87,488	-				+1.5
87,491	+				+1.9
87,612	+				-0.4
87,821	-				-0.8
87,829	-				-0.8
87,832	-				-2.0
87,832	-				-0.4
87,833	+				-1.1
87,835	-				-1.4
87,836	+				-2.5
87,836	+				+1.3
87,837	-				-1.0
87,838	+				-0.7
87,838	+				-2.1
87,839	-				-1.3
87,839	-				-0.3
87,839	-				-1.5
87,839	-				-0.2
87,840	+				-0.2
87,840	+				-0.8
87,840	+				-1.7
87,840	+				+0.2
87,840	+				-2.8
87,847	-				+0.2
87,856	-				-0.1
87,856	-				-0.6
87,856	-				-1.4
87,856	-				-0.3
87,857	+				-1.1
87,857	+				-0.2
87,861	-				+0.5
87,878	-				-0.5
87,882	-				-0.3
87,882	-				-0.1
87,884	-				+1.3
87,884	-				+1.7
87,884	-				+0.1
87,884	-				+0.1
87,884	-				+0.9
87,885	+				-2.0
88,056	-		MMP_RS00445	0.13	-0.1
88,057	+		MMP_RS00445	0.13	-2.6
88,057	+		MMP_RS00445	0.13	-2.0
88,057	+		MMP_RS00445	0.13	-0.7
88,058	-		MMP_RS00445	0.13	-1.1
88,058	-		MMP_RS00445	0.13	+0.2
88,059	+		MMP_RS00445	0.13	-1.4
88,059	+		MMP_RS00445	0.13	-0.2
88,061	+		MMP_RS00445	0.14	+0.1
88,061	+		MMP_RS00445	0.14	-0.8
88,061	+		MMP_RS00445	0.14	-0.6
88,135	-		MMP_RS00445	0.24	-0.0
88,136	+		MMP_RS00445	0.24	+0.2
88,231	-		MMP_RS00445	0.37	-0.1
88,281	-		MMP_RS00445	0.44	+0.5
88,347	+		MMP_RS00445	0.53	-0.7
88,404	+		MMP_RS00445	0.61	-0.2
88,406	+		MMP_RS00445	0.61	+1.7
88,551	-		MMP_RS00445	0.81	+0.5
88,581	+		MMP_RS00445	0.85	+0.7
88,590	-		MMP_RS00445	0.86	-0.0
88,591	+		MMP_RS00445	0.86	-1.6
88,608	+		MMP_RS00445	0.89	-0.4
88,636	-				-0.8
88,637	+				-0.5
88,844	-		MMP_RS00450	0.16	-0.3
89,338	+		MMP_RS00450	0.75	+0.3
89,534	+				+0.4
89,553	-				+2.5
89,560	-				+0.6
89,561	+				-0.7
89,565	-				+0.5
89,618	-				-0.7
89,619	+				+1.1
89,620	-				-0.2
89,660	-				+1.7
89,660	-				+0.8
89,660	-				+0.0
89,660	-				-0.7
89,660	-				-0.4
89,661	+				+5.1
89,661	+				+0.7
89,661	+				+0.5
89,661	+				+0.9
89,662	-				+1.6
89,662	-				+0.8
89,662	-				-0.2
89,663	+				+4.5
89,663	+				+0.9
89,663	+				+2.5