Experiment: MoLS4 with L-Serine as nutrient 10mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1147 and DVU1148 are separated by 1 nucleotides DVU1148 and DORF9582 are separated by 593 nucleotides DORF9582 and DORF9585 are separated by 81 nucleotides
DVU1147: DVU1147 - alginate o-acetyltransferase AlgI, putative (TIGR), at 1,241,837 to 1,243,216
DVU1147
DVU1148: DVU1148 - conserved hypothetical protein (TIGR), at 1,243,218 to 1,244,264
DVU1148
DORF9582: DORF9582 - no description, at 1,244,858 to 1,245,076
DORF9582
DORF9585: DORF9585 - no description, at 1,245,158 to 1,245,361
DORF9585
Position (kb) 1243
1244
1245 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 1242.331 kb on + strand, within DVU1147 at 1242.331 kb on + strand, within DVU1147 at 1242.331 kb on + strand, within DVU1147 at 1242.339 kb on - strand, within DVU1147 at 1242.339 kb on - strand, within DVU1147 at 1242.339 kb on - strand, within DVU1147 at 1242.417 kb on - strand, within DVU1147 at 1242.500 kb on - strand, within DVU1147 at 1242.560 kb on + strand, within DVU1147 at 1242.574 kb on - strand, within DVU1147 at 1242.592 kb on + strand, within DVU1147 at 1243.437 kb on - strand, within DVU1148 at 1243.444 kb on - strand, within DVU1148 at 1243.627 kb on + strand, within DVU1148 at 1243.822 kb on + strand, within DVU1148 at 1243.832 kb on + strand, within DVU1148 at 1244.160 kb on + strand at 1244.168 kb on - strand at 1244.313 kb on + strand at 1244.340 kb on + strand at 1244.369 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.418 kb on - strand at 1244.457 kb on - strand at 1244.546 kb on + strand at 1244.570 kb on - strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.589 kb on + strand at 1244.589 kb on + strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.597 kb on - strand at 1244.616 kb on - strand at 1244.616 kb on - strand at 1244.638 kb on - strand at 1244.663 kb on - strand at 1244.733 kb on - strand at 1244.833 kb on - strand at 1244.845 kb on + strand at 1244.896 kb on - strand, within DORF9582 at 1244.953 kb on + strand, within DORF9582 at 1244.999 kb on + strand, within DORF9582 at 1245.031 kb on - strand, within DORF9582 at 1245.031 kb on - strand, within DORF9582 at 1245.136 kb on + strand at 1245.210 kb on - strand, within DORF9585
Per-strain Table
Position Strand Gene LocusTag Fraction MoLS4 with L-Serine as nutrient 10mM remove 1,242,331 + DVU1147 0.36 +0.7 1,242,331 + DVU1147 0.36 -1.5 1,242,331 + DVU1147 0.36 +0.0 1,242,339 - DVU1147 0.36 -1.0 1,242,339 - DVU1147 0.36 -0.4 1,242,339 - DVU1147 0.36 -1.9 1,242,417 - DVU1147 0.42 -0.0 1,242,500 - DVU1147 0.48 -0.1 1,242,560 + DVU1147 0.52 +0.0 1,242,574 - DVU1147 0.53 -0.0 1,242,592 + DVU1147 0.55 -1.0 1,243,437 - DVU1148 0.21 -1.5 1,243,444 - DVU1148 0.22 -0.5 1,243,627 + DVU1148 0.39 -0.5 1,243,822 + DVU1148 0.58 -0.5 1,243,832 + DVU1148 0.59 -0.3 1,244,160 + -0.8 1,244,168 - -0.4 1,244,313 + +0.5 1,244,340 + +0.4 1,244,369 + -0.1 1,244,410 + +0.0 1,244,410 + +0.4 1,244,410 + -0.3 1,244,410 + +0.2 1,244,410 + -0.7 1,244,410 + +1.5 1,244,418 - -0.3 1,244,457 - -1.8 1,244,546 + -0.3 1,244,570 - -0.1 1,244,588 + -0.6 1,244,588 + +0.1 1,244,588 + +0.2 1,244,588 + +4.1 1,244,589 + -0.1 1,244,589 + -0.4 1,244,596 - -0.6 1,244,596 - +0.9 1,244,596 - +0.3 1,244,596 - +0.0 1,244,596 - -0.9 1,244,597 - +0.2 1,244,616 - -0.5 1,244,616 - -0.7 1,244,638 - +0.0 1,244,663 - +0.5 1,244,733 - -0.4 1,244,833 - -1.5 1,244,845 + -0.3 1,244,896 - DORF9582 0.17 +1.2 1,244,953 + DORF9582 0.43 -0.3 1,244,999 + DORF9582 0.64 -0.3 1,245,031 - DORF9582 0.79 -0.7 1,245,031 - DORF9582 0.79 -0.5 1,245,136 + -0.4 1,245,210 - DORF9585 0.25 -0.5
Or see this region's nucleotide sequence