Experiment: hydrous ferric oxide electron acceptor
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0530 and arsR are separated by 491 nucleotides arsR and SO0533 are separated by 35 nucleotides SO0533 and SO0534 are separated by 9 nucleotides
SO0530: SO0530 - transporter, LysE family (NCBI ptt file), at 552,804 to 553,415
SO0530
SO0532: arsR - arsenical resistence operon repressor (NCBI ptt file), at 553,907 to 554,251
arsR
SO0533: SO0533 - arsenate reductase, putative (NCBI ptt file), at 554,287 to 554,802
SO0533
SO0534: SO0534 - arsenical pump membrane protein, putative (NCBI ptt file), at 554,812 to 555,831
SO0534
Position (kb) 553
554
555 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 552.934 kb on + strand, within SO0530 at 553.062 kb on + strand, within SO0530 at 553.158 kb on + strand, within SO0530 at 553.205 kb on + strand, within SO0530 at 553.301 kb on - strand, within SO0530 at 553.356 kb on + strand at 553.361 kb on + strand at 553.361 kb on + strand at 553.361 kb on + strand at 553.361 kb on + strand at 553.364 kb on - strand at 553.369 kb on - strand at 553.369 kb on - strand at 553.374 kb on - strand at 553.537 kb on + strand at 553.545 kb on + strand at 553.545 kb on - strand at 553.595 kb on - strand at 553.599 kb on + strand at 553.602 kb on - strand at 553.615 kb on + strand at 553.616 kb on - strand at 553.663 kb on + strand at 553.684 kb on - strand at 553.694 kb on + strand at 553.719 kb on + strand at 553.727 kb on - strand at 553.774 kb on + strand at 553.959 kb on + strand, within arsR at 554.125 kb on + strand, within arsR at 554.125 kb on + strand, within arsR at 554.133 kb on - strand, within arsR at 554.133 kb on - strand, within arsR at 554.277 kb on + strand at 554.280 kb on - strand at 554.386 kb on - strand, within SO0533 at 554.407 kb on + strand, within SO0533 at 554.500 kb on + strand, within SO0533 at 554.522 kb on - strand, within SO0533 at 554.558 kb on - strand, within SO0533 at 554.568 kb on - strand, within SO0533 at 554.626 kb on + strand, within SO0533 at 554.636 kb on + strand, within SO0533 at 554.636 kb on + strand, within SO0533 at 554.644 kb on - strand, within SO0533 at 554.644 kb on - strand, within SO0533 at 554.713 kb on - strand, within SO0533 at 554.714 kb on - strand, within SO0533 at 554.769 kb on - strand at 554.848 kb on + strand at 554.975 kb on - strand, within SO0534 at 555.125 kb on + strand, within SO0534 at 555.176 kb on + strand, within SO0534 at 555.183 kb on + strand, within SO0534 at 555.184 kb on - strand, within SO0534 at 555.191 kb on + strand, within SO0534 at 555.191 kb on - strand, within SO0534 at 555.199 kb on - strand, within SO0534 at 555.219 kb on + strand, within SO0534
Per-strain Table
Position Strand Gene LocusTag Fraction hydrous ferric oxide electron acceptor remove 552,934 + SO0530 0.21 -0.4 553,062 + SO0530 0.42 -0.8 553,158 + SO0530 0.58 +1.0 553,205 + SO0530 0.66 -0.3 553,301 - SO0530 0.81 -0.3 553,356 + -2.2 553,361 + -0.8 553,361 + +0.3 553,361 + +0.6 553,361 + -2.1 553,364 - -0.8 553,369 - +0.7 553,369 - +0.5 553,374 - -1.5 553,537 + +0.8 553,545 + +1.2 553,545 - +0.3 553,595 - +0.1 553,599 + +0.5 553,602 - -0.1 553,615 + -2.4 553,616 - +0.4 553,663 + -0.5 553,684 - -0.8 553,694 + +0.1 553,719 + -0.5 553,727 - +0.3 553,774 + -0.1 553,959 + arsR SO0532 0.15 -0.1 554,125 + arsR SO0532 0.63 -2.3 554,125 + arsR SO0532 0.63 -3.8 554,133 - arsR SO0532 0.66 -0.0 554,133 - arsR SO0532 0.66 -2.0 554,277 + +0.2 554,280 - +0.9 554,386 - SO0533 0.19 -2.1 554,407 + SO0533 0.23 -1.5 554,500 + SO0533 0.41 -0.0 554,522 - SO0533 0.46 +1.3 554,558 - SO0533 0.53 +1.2 554,568 - SO0533 0.54 +1.2 554,626 + SO0533 0.66 +1.4 554,636 + SO0533 0.68 -3.2 554,636 + SO0533 0.68 -1.9 554,644 - SO0533 0.69 +1.3 554,644 - SO0533 0.69 +1.0 554,713 - SO0533 0.83 +0.2 554,714 - SO0533 0.83 -1.2 554,769 - +1.4 554,848 + +0.4 554,975 - SO0534 0.16 +0.3 555,125 + SO0534 0.31 +0.2 555,176 + SO0534 0.36 +0.8 555,183 + SO0534 0.36 -0.3 555,184 - SO0534 0.36 -0.9 555,191 + SO0534 0.37 +0.9 555,191 - SO0534 0.37 -1.3 555,199 - SO0534 0.38 -1.8 555,219 + SO0534 0.40 +0.8
Or see this region's nucleotide sequence